PQI

Percent of sequences in Uniprot

The raw score is the percentage of sequences in the proteome that appear in the Uniprot database with 100% sequence identity.

Human readable 5 star rating:

Scores are mapped to a human-readable 1-5 star rating using a custom, universal function. Please see the About page for details.

Per Genome Scores

Genome Measure Metric Rating
Campylobacter hominis ATCC BAA-381 99.9400 99.940000 0.967919
Polaromonas naphthalenivorans CJ2 99.8600 99.860000 0.954679
Metallosphaera sedula DSM 5348 99.7800 99.780000 0.946204
Clostridium beijerinckii NCIMB 8052 100.0000 100.000000 1.000000
Campylobacter jejuni subsp. doylei 269.97 99.9700 99.970000 0.979928
Yersinia pseudotuberculosis IP 31758 100.0000 100.000000 1.000000
Mycobacterium bovis BCG str. Pasteur 1173P2 100.0000 100.000000 1.000000
Enterobacter sp. 638 99.9100 99.910000 0.961774
Alteromonas macleodii str. 'Aegean Sea MED64' 100.0000 100.000000 1.000000
Pelotomaculum thermopropionicum SI 99.7900 99.790000 0.946909
Mycobacterium bovis BCG str. Tokyo 172 100.0000 100.000000 1.000000
Bacillus cereus 03BB102 100.0000 100.000000 1.000000
Anaplasma marginale str. Florida 99.8900 99.890000 0.959266
Cyanothece sp. PCC 8802 100.0000 100.000000 1.000000
Candidatus Accumulibacter phosphatis clade IIA str. UW-1 100.0000 100.000000 1.000000
Mycoplasma fermentans PG18 99.7600 99.760000 0.944521
Sulfolobus islandicus Y.N.15.51 100.0000 100.000000 1.000000
Exiguobacterium sp. AT1b 100.0000 100.000000 1.000000
Neisseria meningitidis alpha14 100.0000 100.000000 1.000000
Sulfolobus islandicus Y.G.57.14 100.0000 100.000000 1.000000
Escherichia coli 'BL21-Gold(DE3)pLysS AG' 100.0000 100.000000 1.000000
Escherichia coli O104:H4 str. 2009EL-2071 100.0000 100.000000 1.000000
Streptococcus suis P1/7 100.0000 100.000000 1.000000
Leptotrichia buccalis C-1013-b 100.0000 100.000000 1.000000
Laribacter hongkongensis HLHK9 100.0000 100.000000 1.000000
Chlamydia trachomatis L2/25667R 100.0000 100.000000 1.000000
Edwardsiella ictaluri 93-146 100.0000 100.000000 1.000000
Chlamydia trachomatis B/Jali20/OT 100.0000 100.000000 1.000000
Atopobium parvulum DSM 20469 100.0000 100.000000 1.000000
Babjeviella inositovora NRRL Y-12698 v1.0 0.2200 0.220000 0.005306
Streptococcus equi subsp. equi 4047 100.0000 100.000000 1.000000
Runella slithyformis DSM 19594 100.0000 100.000000 1.000000
Neorickettsia risticii str. Illinois 100.0000 100.000000 1.000000
Acidovorax ebreus TPSY 100.0000 100.000000 1.000000
Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 100.0000 100.000000 1.000000
Rickettsia peacockii str. Rustic 100.0000 100.000000 1.000000
Thermococcus sibiricus MM 739 100.0000 100.000000 1.000000
Bacillus thuringiensis HD-771 100.0000 100.000000 1.000000
Agrobacterium radiobacter K84 99.9400 99.940000 0.967919
Clostridium cellulolyticum H10 100.0000 100.000000 1.000000
Amphibacillus xylanus NBRC 15112 100.0000 100.000000 1.000000
Pseudomonas putida F1 99.9400 99.940000 0.967919
Francisella novicida U112 99.9900 99.990000 0.992240
Desulfotomaculum reducens MI-1 100.0000 100.000000 1.000000
Pediococcus pentosaceus ATCC 25745 100.0000 100.000000 1.000000
Staphylothermus marinus F1 99.7500 99.750000 0.943175
Shewanella sp. MR-4 99.7100 99.710000 0.940633
Parabacteroides distasonis ATCC 8503 99.9800 99.980000 0.985397
Synechococcus sp. CC9311 99.3300 99.330000 0.923578
Clostridium botulinum A str. ATCC 3502 99.9800 99.980000 0.985397
Corynebacterium urealyticum DSM 7111 100.0000 100.000000 1.000000
Nocardioides sp. JS614 99.9400 99.940000 0.967919
Leptospira borgpetersenii serovar Hardjo-bovis str. L550 100.0000 100.000000 1.000000
Syntrophobacter fumaroxidans MPOB 99.8500 99.850000 0.953608
Escherichia coli 536 100.0000 100.000000 1.000000
Alkaliphilus metalliredigens QYMF 99.8500 99.850000 0.953608
Borrelia afzelii HLJ01 100.0000 100.000000 1.000000
Methanococcus maripaludis C5 99.7900 99.790000 0.946909
Mesorhizobium sp. BNC1 99.5800 99.580000 0.933034
Azoarcus sp. BH72 99.7300 99.730000 0.942041
Bacillus subtilis subsp. subtilis 6051-HGW 100.0000 100.000000 1.000000
Bacteroides vulgatus ATCC 8482 100.0000 100.000000 1.000000
Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 99.8100 99.810000 0.949783
Desulfovibrio vulgaris subsp. vulgaris DP4 99.8700 99.870000 0.956117
Micavibrio aeruginosavorus EPB 100.0000 100.000000 1.000000
Burkholderia ambifaria AMMD 99.7900 99.790000 0.946909
Thermotoga petrophila RKU-1 99.9700 99.970000 0.979928
Salmonella enterica subsp. enterica serovar Javiana str. CFSAN001992 100.0000 100.000000 1.000000
Bacillus cereus subsp. cytotoxis NVH 391-98 99.9300 99.930000 0.965199
Psychromonas ingrahamii 37 99.8000 99.800000 0.947980
Lactobacillus paracasei subsp. paracasei 8700:2 100.0000 100.000000 1.000000
Prochlorococcus marinus str. MIT 9515 99.6000 99.600000 0.933893
Marinomonas sp. MWYL1 99.9300 99.930000 0.965199
Dehalococcoides sp. BAV1 99.8700 99.870000 0.956117
Methanosaeta thermophila PT 99.3500 99.350000 0.924254
Oryza glumaepatula 22 16.2200 16.220000 0.200927
Clostridium novyi NT 99.8400 99.840000 0.952813
Lactobacillus gasseri ATCC 33323 99.9300 99.930000 0.965199
Methylibium petroleiphilum PM1 99.7900 99.790000 0.946909
Vibrio cholerae O395 100.0000 100.000000 1.000000
Clostridium kluyveri DSM 555 99.9700 99.970000 0.979928
Rhizobium leguminosarum bv. viciae 3841 99.5000 99.500000 0.929140
Paenibacillus polymyxa CR1 100.0000 100.000000 1.000000
Pseudomonas putida H8234 100.0000 100.000000 1.000000
Saccharopolyspora erythraea NRRL 2338 99.9500 99.950000 0.971280
Neisseria meningitidis FAM18 99.9800 99.980000 0.985397
Pectobacterium carotovorum subsp. carotovorum PC1 100.0000 100.000000 1.000000
Deinococcus deserti VCD115 86.4900 86.490000 0.817605
Clostridium kluyveri NBRC 12016 99.9300 99.930000 0.965199
Escherichia coli O157:H7 str. EC4115 100.0000 100.000000 1.000000
Brucella melitensis ATCC 23457 100.0000 100.000000 1.000000
Sulfolobus islandicus M.16.4 100.0000 100.000000 1.000000
Geobacter sp. M21 100.0000 100.000000 1.000000
Candidatus Endolissoclinum faulkneri L2 100.0000 100.000000 1.000000
Anaerococcus prevotii DSM 20548 100.0000 100.000000 1.000000
Candidatus Sulcia muelleri SMDSEM 100.0000 100.000000 1.000000
Thermotoga neapolitana DSM 4359 99.9500 99.950000 0.971280
Escherichia coli W 100.0000 100.000000 1.000000
Candidatus Hodgkinia cicadicola Dsem 100.0000 100.000000 1.000000
Geobacillus sp. WCH70 100.0000 100.000000 1.000000
Capnocytophaga ochracea DSM 7271 100.0000 100.000000 1.000000
Clostridium botulinum A2 str. Kyoto 100.0000 100.000000 1.000000
Eggerthella lenta DSM 2243 100.0000 100.000000 1.000000
Bacillus cereus Q1 100.0000 100.000000 1.000000
Saccharomonospora viridis DSM 43017 100.0000 100.000000 1.000000
Mycobacterium tuberculosis KZN 1435 100.0000 100.000000 1.000000
Pediococcus pentosaceus SL4 100.0000 100.000000 1.000000
Acetobacter pasteurianus IFO 3283-01 100.0000 100.000000 1.000000
Streptococcus dysgalactiae subsp. equisimilis RE378 100.0000 100.000000 1.000000
Sinorhizobium fredii NGR234 99.9600 99.960000 0.975192
Streptococcus pneumoniae P1031 100.0000 100.000000 1.000000
Brucella suis 1330 100.0000 100.000000 1.000000
Macrococcus caseolyticus JCSC5402 99.9300 99.930000 0.965199
Methylotenera mobilis JLW8 100.0000 100.000000 1.000000
Helicobacter pylori B38 100.0000 100.000000 1.000000
Brucella microti CCM 4915 100.0000 100.000000 1.000000
Actinosynnema mirum DSM 43827 100.0000 100.000000 1.000000
Thermoplasmatales archaeon BRNA1 100.0000 100.000000 1.000000
Shewanella baltica OS185 99.9700 99.970000 0.979928
Frankia alni ACN14a 99.3500 99.350000 0.924254
Thermobacillus composti KWC4 100.0000 100.000000 1.000000
Tulasnella calospora AL13/4D v1.0 0.0500 0.050000 0.001814
Actinobacillus pleuropneumoniae serovar 5b str. L20 99.9500 99.950000 0.971280
Nitratiruptor sp. SB155-2 100.0000 100.000000 1.000000
Taylorella equigenitalis ATCC 35865 100.0000 100.000000 1.000000
Parvibaculum lavamentivorans DS-1 99.7700 99.770000 0.945408
Arthrobacter sp. FB24 98.3200 98.320000 0.907113
Yersinia enterocolitica subsp. enterocolitica 8081 99.7600 99.760000 0.944521
Salinispora tropica CNB-440 99.8700 99.870000 0.956117
Staphylococcus aureus subsp. aureus JH1 100.0000 100.000000 1.000000
Escherichia coli APEC O1 100.0000 100.000000 1.000000
Brucella ovis ATCC 25840 99.9900 99.990000 0.992240
Legionella pneumophila subsp. pneumophila 100.0000 100.000000 1.000000
Bacillus licheniformis 9945A 100.0000 100.000000 1.000000
Acinetobacter baumannii ATCC 17978 98.1000 98.100000 0.904801
Burkholderia mallei SAVP1 100.0000 100.000000 1.000000
Marinobacter aquaeolei VT8 99.9100 99.910000 0.961774
Lactococcus lactis subsp. lactis KLDS 4.0325 100.0000 100.000000 1.000000
Lactobacillus casei ATCC 334 100.0000 100.000000 1.000000
Methanobrevibacter smithii ATCC 35061 99.8800 99.880000 0.957646
Caldicellulosiruptor saccharolyticus DSM 8903 99.9300 99.930000 0.965199
Shewanella loihica PV-4 99.7700 99.770000 0.945408
Gramella forsetii KT0803 99.8300 99.830000 0.952017
Sulfurovum sp. NBC37-1 99.9200 99.920000 0.963395
Geobacillus thermodenitrificans NG80-2 99.3200 99.320000 0.923332
Psychrobacter sp. PRwf-1 99.9200 99.920000 0.963395
Salmonella enterica subsp. enterica Serovar Heidelberg str. CFSAN002069 100.0000 100.000000 1.000000
Roseburia intestinalis 100.0000 100.000000 1.000000
Haloquadratum walsbyi DSM 16790 89.4800 89.480000 0.839004
Chlorobium phaeovibrioides DSM 265 99.8300 99.830000 0.952017
Burkholderia mallei NCTC 10247 100.0000 100.000000 1.000000
Flavobacterium johnsoniae UW101 99.9000 99.900000 0.960154
Burkholderia pseudomallei 1106a 100.0000 100.000000 1.000000
Cycloclasticus zancles 7-ME 100.0000 100.000000 1.000000
Rhodobacter sphaeroides ATCC 17029 99.9600 99.960000 0.975192
Mycobacterium sp. JLS 99.9300 99.930000 0.965199
Yersinia pestis A1122 100.0000 100.000000 1.000000
Methanoculleus marisnigri JR1 99.8800 99.880000 0.957646
Shewanella sp. MR-7 99.7200 99.720000 0.941520
Candidatus Solibacter usitatus Ellin6076 99.9600 99.960000 0.975192
Bradyrhizobium sp. ORS 278 99.8100 99.810000 0.949783
Paracoccus denitrificans PD1222 99.8500 99.850000 0.953608
Mycobacterium vanbaalenii PYR-1 99.8400 99.840000 0.952813
Synechococcus sp. WH 7803 99.7800 99.780000 0.946204
Klebsiella pneumoniae NTUH-K2044 99.9900 99.990000 0.992240
Candidatus Symbiobacter mobilis Comamonadaceae bacterium CR 100.0000 100.000000 1.000000
Variovorax paradoxus S110 100.0000 100.000000 1.000000
Rickettsia africae ESF-5 100.0000 100.000000 1.000000
Dyadobacter fermentans DSM 18053 100.0000 100.000000 1.000000
Kosmotoga olearia TBF 19.5.1 100.0000 100.000000 1.000000
Brevibacillus brevis NBRC 100599 100.0000 100.000000 1.000000
Kytococcus sedentarius DSM 20547 100.0000 100.000000 1.000000
Blattabacterium sp. (Panesthia angustipennis spadica) Blattabacterium sp. (Panesthia angustipennis spadica) str. BPAA 100.0000 100.000000 1.000000
Corynebacterium kroppenstedtii DSM 44385 99.9500 99.950000 0.971280
Chlamydia trachomatis L2b/795 100.0000 100.000000 1.000000
Escherichia coli BW2952 100.0000 100.000000 1.000000
Desulfohalobium retbaense DSM 5692 100.0000 100.000000 1.000000
Acidobacterium capsulatum ATCC 51196 100.0000 100.000000 1.000000
Cyanothece sp. PCC 7425 99.9800 99.980000 0.985397
Bacillus anthracis str. A0248 100.0000 100.000000 1.000000
Spiribacter salinus M19-40 100.0000 100.000000 1.000000
Teredinibacter turnerae T7901 99.9800 99.980000 0.985397
Desulfotomaculum acetoxidans DSM 771 100.0000 100.000000 1.000000
Micrococcus luteus NCTC 2665 99.9600 99.960000 0.975192
Chloroflexus sp. Y-400-fl 100.0000 100.000000 1.000000
Candidatus Caldiarchaeum subterraneum 100.0000 100.000000 1.000000
Mannheimia haemolytica USDA-ARS-USMARC-183 100.0000 100.000000 1.000000
Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) 100.0000 100.000000 1.000000
Rhodococcus erythropolis PR4 99.9700 99.970000 0.979928
Cryptobacterium curtum DSM 15641 100.0000 100.000000 1.000000
Nakamurella multipartita DSM 44233 100.0000 100.000000 1.000000
Escherichia coli B str. REL606 100.0000 100.000000 1.000000
Jonesia denitrificans DSM 20603 100.0000 100.000000 1.000000
Burkholderia glumae BGR1 100.0000 100.000000 1.000000
Ralstonia pickettii 12D 100.0000 100.000000 1.000000
Candidatus Portiera aleyrodidarum BT-Q-AWRs 100.0000 100.000000 1.000000
Chlamydia trachomatis L2b/Ams4 100.0000 100.000000 1.000000
Shewanella putrefaciens CN-32 99.9600 99.960000 0.975192
Alcanivorax borkumensis SK2 99.3000 99.300000 0.922748
Staphylococcus aureus subsp. aureus JH9 100.0000 100.000000 1.000000
Borrelia garinii NMJW1 100.0000 100.000000 1.000000
Xanthobacter autotrophicus Py2 99.9000 99.900000 0.960154
Thermococcus sp. CL1 100.0000 100.000000 1.000000
Pseudomonas stutzeri A1501 99.4800 99.480000 0.928189
Clostridium perfringens ATCC 13124 99.9800 99.980000 0.985397
Listeria welshimeri serovar 6b str. SLCC5334 99.9900 99.990000 0.992240
Streptococcus suis 98HAH33 99.9800 99.980000 0.985397
Sorangium cellulosum So0157-2 100.0000 100.000000 1.000000
Sphingomonas wittichii RW1 99.8500 99.850000 0.953608
Ralstonia eutropha H16 99.8800 99.880000 0.957646
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 100.0000 100.000000 1.000000
Syntrophomonas wolfei subsp. wolfei str. Goettingen 99.8000 99.800000 0.947980
Sinorhizobium medicae WSM419 99.9200 99.920000 0.963395
Coxiella burnetii Dugway 5J108-111 99.2400 99.240000 0.921270
Halorhabdus tiamatea SARL4B 100.0000 100.000000 1.000000
Bacillus amyloliquefaciens FZB42 99.9900 99.990000 0.992240
Shewanella amazonensis SB2B 99.4800 99.480000 0.928189
Corynebacterium glutamicum SCgG1 100.0000 100.000000 1.000000
Orientia tsutsugamushi str. Boryong 99.5900 99.590000 0.933555
Thermotoga thermarum DSM 5069 100.0000 100.000000 1.000000
Roseobacter denitrificans OCh 114 99.5200 99.520000 0.930090
Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293 100.0000 100.000000 1.000000
Pseudomonas aeruginosa UCBPP-PA14 100.0000 100.000000 1.000000
Clostridium botulinum A str. Hall 99.9600 99.960000 0.975192
Helicobacter pylori Aklavik86 100.0000 100.000000 1.000000
Thermofilum pendens Hrk 5 99.6300 99.630000 0.935914
Legionella pneumophila str. Corby 99.9500 99.950000 0.971280
Maricaulis maris MCS10 99.8000 99.800000 0.947980
Thermosipho melanesiensis BI429 100.0000 100.000000 1.000000
Vibrio nigripulchritudo VibrioScope 100.0000 100.000000 1.000000
Campylobacter jejuni subsp. jejuni 00-2425 100.0000 100.000000 1.000000
Shewanella baltica OS155 99.9700 99.970000 0.979928
Helicobacter pylori Aklavik117 100.0000 100.000000 1.000000
Burkholderia vietnamiensis G4 99.9400 99.940000 0.967919
Bacillus thuringiensis str. Al Hakam 99.9300 99.930000 0.965199
Staphylococcus aureus subsp. aureus ECT-R 2 100.0000 100.000000 1.000000
Alteromonas macleodii str. 'English Channel 673' 100.0000 100.000000 1.000000
Clavibacter michiganensis subsp. michiganensis NCPPB 382 100.0000 100.000000 1.000000
Aeromonas hydrophila subsp. hydrophila ATCC 7966 99.5000 99.500000 0.929140
Pyrobaculum islandicum DSM 4184 99.7000 99.700000 0.939837
Campylobacter fetus subsp. fetus 82-40 99.9800 99.980000 0.985397
Burkholderia pseudomallei 668 99.9900 99.990000 0.992240
Cytophaga hutchinsonii ATCC 33406 99.8700 99.870000 0.956117
Burkholderia mallei NCTC 10229 99.8600 99.860000 0.954679
Lactococcus lactis subsp. cremoris MG1363 99.9600 99.960000 0.975192
Sulfurihydrogenibium azorense Az-Fu1 100.0000 100.000000 1.000000
Caulobacter crescentus NA1000 95.7200 95.720000 0.884001
Burkholderia pseudomallei MSHR346 100.0000 100.000000 1.000000
Acidimicrobium ferrooxidans DSM 10331 100.0000 100.000000 1.000000
Rhodococcus opacus B4 100.0000 100.000000 1.000000
Desulfovibrio salexigens DSM 2638 100.0000 100.000000 1.000000
Chlamydia trachomatis L2b/Ams3 100.0000 100.000000 1.000000
Brachybacterium faecium DSM 4810 100.0000 100.000000 1.000000
Paenibacillus sp. JDR-2 100.0000 100.000000 1.000000
Dickeya zeae Ech1591 99.9900 99.990000 0.992240
Brachyspira hyodysenteriae WA1 100.0000 100.000000 1.000000
Trichoderma citrinoviride v1.0 2.7900 2.790000 0.041543
Photorhabdus asymbiotica 99.9900 99.990000 0.992240
Aggregatibacter aphrophilus NJ8700 99.9800 99.980000 0.985397
Tolumonas auensis DSM 9187 99.9700 99.970000 0.979928
Leuconostoc gelidum JB7 100.0000 100.000000 1.000000
Eubacterium eligens ATCC 27750 100.0000 100.000000 1.000000
Mycoplasma conjunctivae HRC/581 99.8600 99.860000 0.954679
Methanocaldococcus fervens AG86 100.0000 100.000000 1.000000
Rhodobacter sphaeroides KD131 99.9500 99.950000 0.971280
Halorhabdus utahensis DSM 12940 100.0000 100.000000 1.000000
Sulfolobus islandicus M.16.27 99.9900 99.990000 0.992240
Streptococcus salivarius 57.I 99.9800 99.980000 0.985397
Streptococcus equi subsp. zooepidemicus 100.0000 100.000000 1.000000
Vibrio cholerae MJ-1236 100.0000 100.000000 1.000000
Escherichia coli O157:H7 str. TW14359 100.0000 100.000000 1.000000
Desulfobacterium autotrophicum HRM2 99.9800 99.980000 0.985397
Streptococcus suis BM407 100.0000 100.000000 1.000000
Pedobacter heparinus DSM 2366 99.9800 99.980000 0.985397
Candidatus Liberibacter asiaticus str. psy62 100.0000 100.000000 1.000000
Francisella tularensis subsp. tularensis WY96-3418 100.0000 100.000000 1.000000
Halorhodospira halophila SL1 99.7100 99.710000 0.940633
Phaeobacter gallaeciensis DSM 17395 100.0000 100.000000 1.000000
Pelobacter propionicus DSM 2379 99.9200 99.920000 0.963395
Prochlorococcus marinus str. NATL1A 99.6400 99.640000 0.936435
Mycobacterium smegmatis str. MC2 155 99.6800 99.680000 0.938062
Campylobacter jejuni subsp. jejuni 81-176 99.9900 99.990000 0.992240
Geobacter uraniireducens Rf4 99.8600 99.860000 0.954679
Leptospira borgpetersenii serovar Hardjo-bovis str. JB197 100.0000 100.000000 1.000000
Dichelobacter nodosus VCS1703A 99.9300 99.930000 0.965199
Nitrosomonas eutropha C91 99.7500 99.750000 0.943175
Rhodobacter sphaeroides ATCC 17025 99.7800 99.780000 0.946204
Fervidobacterium nodosum Rt17-B1 99.9400 99.940000 0.967919
Magnetospirillum gryphiswaldense MSR-1 v2 100.0000 100.000000 1.000000
Granulibacter bethesdensis CGDNIH1 99.6300 99.630000 0.935914
Klebsiella pneumoniae subsp. pneumoniae 1084 100.0000 100.000000 1.000000
Buchnera aphidicola BCc 99.7500 99.750000 0.943175
Methanoregula boonei 6A8 99.7100 99.710000 0.940633
Acidothermus cellulolyticus 11B 99.8200 99.820000 0.951221
Rhodococcus jostii RHA1 99.8800 99.880000 0.957646
Shigella flexneri 5 str. 8401 100.0000 100.000000 1.000000
Clostridium botulinum A str. ATCC 19397 99.9900 99.990000 0.992240
Prochlorococcus marinus str. MIT 9303 99.4200 99.420000 0.926620
Sphaerochaeta pleomorpha str. Grapes 100.0000 100.000000 1.000000
Chlorobium phaeobacteroides DSM 266 99.7400 99.740000 0.942379
Shewanella frigidimarina NCIMB 400 99.7600 99.760000 0.944521
Clostridium difficile 630 100.0000 100.000000 1.000000
Campylobacter curvus 525.92 99.6900 99.690000 0.938858
Mannheimia haemolytica USDA-ARS-USMARC-185 100.0000 100.000000 1.000000
Francisella tularensis subsp. holarctica OSU18 99.9800 99.980000 0.985397
Ochrobactrum anthropi ATCC 49188 99.9400 99.940000 0.967919
Shewanella sp. ANA-3 99.8000 99.800000 0.947980
Bradyrhizobium sp. BTAi1 99.8700 99.870000 0.956117
Acidovorax sp. JS42 99.8300 99.830000 0.952017
Streptococcus suis D12 100.0000 100.000000 1.000000
Aeromonas salmonicida subsp. salmonicida A449 99.9400 99.940000 0.967919
Chlamydia trachomatis C/TW-3 100.0000 100.000000 1.000000
Mycoplasma agalactiae PG2 96.8200 96.820000 0.892797
Mycobacterium sp. KMS 99.9200 99.920000 0.963395
Streptococcus pneumoniae D39 100.0000 100.000000 1.000000
Synechococcus sp. RCC307 99.3300 99.330000 0.923578
Lactobacillus reuteri DSM 20016 100.0000 100.000000 1.000000
Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 100.0000 100.000000 1.000000
Campylobacter jejuni subsp. jejuni NCTC 11168-BN148 100.0000 100.000000 1.000000
Halorubrum lacusprofundi ATCC 49239 100.0000 100.000000 1.000000
Slackia heliotrinireducens DSM 20476 98.9600 98.960000 0.915104
Catenulispora acidiphila DSM 44928 100.0000 100.000000 1.000000
Chlamydia trachomatis G/SotonG1 100.0000 100.000000 1.000000
Clostridium saccharoperbutylacetonicum N1-4(HMT) 100.0000 100.000000 1.000000
Streptococcus iniae SF1 100.0000 100.000000 1.000000
Selenomonas ruminantium subsp. lactilytica TAM6421 100.0000 100.000000 1.000000
Bifidobacterium animalis subsp. lactis Bl-04 100.0000 100.000000 1.000000
Streptococcus pneumoniae JJA 100.0000 100.000000 1.000000
Methylobacterium extorquens AM1 99.9800 99.980000 0.985397
Thermoproteus tenax Kra 1 100.0000 100.000000 1.000000
Kangiella koreensis DSM 16069 100.0000 100.000000 1.000000
Campylobacter lari RM2100 100.0000 100.000000 1.000000
Cochliobolus carbonum 26-R-13 v1.0 99.9100 99.910000 0.961774
Streptococcus dysgalactiae subsp. equisimilis GGS_124 99.9700 99.970000 0.979928
Bartonella grahamii as4aup 100.0000 100.000000 1.000000
Lactobacillus plantarum JDM1 100.0000 100.000000 1.000000
Thermomicrobium roseum DSM 5159 99.9600 99.960000 0.975192
Mannheimia haemolytica USMARC_2286 100.0000 100.000000 1.000000
Bacillus amyloliquefaciens subsp. plantarum UCMB5036 100.0000 100.000000 1.000000
Anaeromyxobacter dehalogenans 2CP-1 99.9800 99.980000 0.985397
Clostridium botulinum Ba4 str. 657 100.0000 100.000000 1.000000
Eubacterium rectale ATCC 33656 100.0000 100.000000 1.000000
Desulfotomaculum kuznetsovii DSM 6115 100.0000 100.000000 1.000000
Methylovorus glucosetrophus SIP3-4 99.9700 99.970000 0.979928
Thioalkalivibrio sulfidophilus HL-EbGr7 99.9700 99.970000 0.979928
Pseudomonas fluorescens SBW25 99.9800 99.980000 0.985397
Listeria monocytogenes serotype 4b str. CLIP 80459 100.0000 100.000000 1.000000
Flavobacteriaceae bacterium 3519-10 100.0000 100.000000 1.000000
Azotobacter vinelandii DJ 100.0000 100.000000 1.000000
Halomicrobium mukohataei DSM 12286 99.9700 99.970000 0.979928
Staphylococcus aureus M1 100.0000 100.000000 1.000000
Mycobacterium leprae Br4923 99.8700 99.870000 0.956117
Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12 100.0000 100.000000 1.000000
Corynebacterium aurimucosum ATCC 700975 100.0000 100.000000 1.000000
Roseiflexus sp. RS-1 99.8900 99.890000 0.959266
Verminephrobacter eiseniae EF01-2 99.6800 99.680000 0.938062
Thermovirga lienii DSM 17291 100.0000 100.000000 1.000000
Bartonella bacilliformis KC583 99.9600 99.960000 0.975192
Janthinobacterium sp. Marseille 99.8500 99.850000 0.953608
Corynebacterium glutamicum R 99.9300 99.930000 0.965199
Haemophilus influenzae PittEE 99.9700 99.970000 0.979928
Shewanella sp. W3-18-1 99.9400 99.940000 0.967919
Mycobacterium gilvum PYR-GCK 99.9500 99.950000 0.971280
Trichodesmium erythraeum IMS101 99.8200 99.820000 0.951221
Pseudomonas aeruginosa PA7 99.9800 99.980000 0.985397
Actinobacillus succinogenes 130Z 99.9700 99.970000 0.979928
Methanocorpusculum labreanum Z 99.6600 99.660000 0.937203
Oenococcus oeni PSU-1 99.9900 99.990000 0.992240
Prochlorococcus marinus str. AS9601 99.6900 99.690000 0.938858
Helicobacter pylori UM299 100.0000 100.000000 1.000000
Streptococcus parasanguinis FW213 100.0000 100.000000 1.000000
Lactococcus lactis subsp. cremoris SK11 99.9800 99.980000 0.985397
Campylobacter jejuni subsp. jejuni 00-2544 100.0000 100.000000 1.000000
Pseudomonas aeruginosa LES431 100.0000 100.000000 1.000000
Haemophilus influenzae PittGG 99.9500 99.950000 0.971280
Mycobacterium tuberculosis H37Ra 100.0000 100.000000 1.000000
Streptococcus suis 05ZYH33 99.9600 99.960000 0.975192
Francisella tularensis subsp. tularensis FSC198 99.9900 99.990000 0.992240
Acidovorax citrulli AAC00-1 99.9000 99.900000 0.960154
Pyrobaculum calidifontis JCM 11548 99.7700 99.770000 0.945408
Pectobacterium sp. SCC3193 100.0000 100.000000 1.000000
Methanococcus aeolicus Nankai-3 99.6600 99.660000 0.937203
Trichinella spiralis 22 94.2100 94.210000 0.872503
Streptococcus thermophilus LMD-9 99.9900 99.990000 0.992240
Azotobacter vinelandii CA6 100.0000 100.000000 1.000000
Clostridium thermocellum ATCC 27405 99.9700 99.970000 0.979928
Paenibacillus larvae subsp. larvae DSM 25430 100.0000 100.000000 1.000000
Pseudomonas mendocina ymp 99.8300 99.830000 0.952017
Streptococcus pyogenes str. Manfredo 100.0000 100.000000 1.000000
Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365 99.8800 99.880000 0.957646
Mycobacterium tuberculosis F11 100.0000 100.000000 1.000000
Lactobacillus brevis ATCC 367 100.0000 100.000000 1.000000
Magnetococcus marinus MC-1 99.8100 99.810000 0.949783
Hyphomonas neptunium ATCC 15444 99.9700 99.970000 0.979928
Anaeromyxobacter sp. Fw109-5 99.8900 99.890000 0.959266
Arthrobacter aurescens TC1 99.7300 99.730000 0.942041
Methanococcus vannielii SB 99.6500 99.650000 0.936956
Kineococcus radiotolerans SRS30216 99.9100 99.910000 0.961774
Mycobacterium avium 104 99.9700 99.970000 0.979928
Treponema pallidum subsp. pallidum DAL-1 100.0000 100.000000 1.000000
Enterococcus casseliflavus EC20 100.0000 100.000000 1.000000
Mycoplasma gallisepticum S6 99.7400 99.740000 0.942379
Thauera sp. MZ1T 99.9700 99.970000 0.979928
Chlamydia trachomatis RC-J/966 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594 100.0000 100.000000 1.000000
Gloeocapsa sp. PCC 7428 100.0000 100.000000 1.000000
Agrobacterium vitis S4 100.0000 100.000000 1.000000
Halothermothrix orenii H 168 100.0000 100.000000 1.000000
Caldicellulosiruptor bescii DSM 6725 99.9700 99.970000 0.979928
Streptococcus pneumoniae 70585 100.0000 100.000000 1.000000
Rhizobium leguminosarum bv. trifolii WSM1325 100.0000 100.000000 1.000000
Streptococcus pneumoniae SPN034156 100.0000 100.000000 1.000000
Streptococcus uberis 0140J 100.0000 100.000000 1.000000
Streptococcus pneumoniae Taiwan19F-14 100.0000 100.000000 1.000000
Dickeya dadantii Ech703 99.9900 99.990000 0.992240
Campylobacter coli 15-537360 100.0000 100.000000 1.000000
Desulfovibrio magneticus RS-1 100.0000 100.000000 1.000000
Bacillus anthracis str. CDC 684 100.0000 100.000000 1.000000
Sulfolobus islandicus M.14.25 100.0000 100.000000 1.000000
Persephonella marina EX-H1 100.0000 100.000000 1.000000
Vibrio cholerae M66-2 100.0000 100.000000 1.000000
Bifidobacterium animalis subsp. lactis DSM 10140 100.0000 100.000000 1.000000
Streptococcus suis SC84 100.0000 100.000000 1.000000
Lactobacillus rhamnosus Lc 705 100.0000 100.000000 1.000000
Staphylococcus carnosus subsp. carnosus TM300 99.9900 99.990000 0.992240
Wolbachia sp. wRi 100.0000 100.000000 1.000000
Beutenbergia cavernae DSM 12333 100.0000 100.000000 1.000000
Staphylococcus aureus ST228/10388 100.0000 100.000000 1.000000
Thermococcus gammatolerans EJ3 99.9500 99.950000 0.971280
Treponema pallidum str. Fribourg-Blanc 100.0000 100.000000 1.000000
Hirschia baltica ATCC 49814 100.0000 100.000000 1.000000
Sulfolobus islandicus L.S.2.15 100.0000 100.000000 1.000000
Chlamydia trachomatis L2/434/Bu(f) 99.9800 99.980000 0.985397
Chitinophaga pinensis DSM 2588 99.9900 99.990000 0.992240
Geobacter daltonii FRC-32 100.0000 100.000000 1.000000
Pyrobaculum arsenaticum DSM 13514 99.8400 99.840000 0.952813
Streptococcus sanguinis SK36 99.9000 99.900000 0.960154
Clostridium botulinum F str. Langeland 100.0000 100.000000 1.000000
Flavobacterium psychrophilum JIP02/86 100.0000 100.000000 1.000000
Herminiimonas arsenicoxydans 92.3700 92.370000 0.859216
Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica) 99.5900 99.590000 0.933555
Bifidobacterium adolescentis ATCC 15703 99.5000 99.500000 0.929140
Yersinia pestis Pestoides F 100.0000 100.000000 1.000000
Candidatus Vesicomyosocius okutanii HA 99.6800 99.680000 0.938062
Methanococcus maripaludis C7 99.7900 99.790000 0.946909
Rhodopseudomonas palustris BisA53 99.6600 99.660000 0.937203
Burkholderia cenocepacia HI2424 99.9100 99.910000 0.961774
Hyperthermus butylicus DSM 5456 99.7500 99.750000 0.943175
Clostridium perfringens SM101 99.8600 99.860000 0.954679
Mycobacterium ulcerans Agy99 99.8000 99.800000 0.947980
Pythium vexans DAOM BR484 22 0.6900 0.690000 0.012701
Staphylococcus aureus subsp. aureus str. Newman 100.0000 100.000000 1.000000
Haemophilus somnus 129PT 99.5400 99.540000 0.931316
Alkalilimnicola ehrlichii MLHE-1 99.4800 99.480000 0.928189
Candidatus Carsonella ruddii PV 100.0000 100.000000 1.000000
Prochlorococcus marinus str. MIT 9301 99.7700 99.770000 0.945408
Herpetosiphon aurantiacus DSM 785 99.9100 99.910000 0.961774
Thermotoga lettingae TMO 99.8500 99.850000 0.953608
Coxiella burnetii RSA 331 99.9800 99.980000 0.985397
Citrobacter koseri ATCC BAA-895 99.9400 99.940000 0.967919
Genome sequence of Rhizobium sp. strain IRBG74 100.0000 100.000000 1.000000
Bordetella petrii DSM 12804 99.4700 99.470000 0.928034
Clostridium phytofermentans ISDg 99.8700 99.870000 0.956117
Sorangium cellulosum 'So ce 56' 99.6700 99.670000 0.937724
Salinispora arenicola CNS-205 99.9600 99.960000 0.975192
Bacillus weihenstephanensis KBAB4 100.0000 100.000000 1.000000
Ignicoccus hospitalis KIN4/I 99.8600 99.860000 0.954679
Candidatus Sulcia muelleri GWSS 99.4100 99.410000 0.926190
Pseudomonas aeruginosa PA1R 100.0000 100.000000 1.000000
Vibrio harveyi ATCC BAA-1116 99.9300 99.930000 0.965199
Solitalea canadensis DSM 3403 100.0000 100.000000 1.000000
Methanococcus maripaludis C6 100.0000 100.000000 1.000000
Campylobacter jejuni subsp. jejuni 81116 100.0000 100.000000 1.000000
Alkaliphilus oremlandii OhILAs 99.9300 99.930000 0.965199
Alcanivorax dieselolei B5 100.0000 100.000000 1.000000
Methylobacterium extorquens DM4 99.9900 99.990000 0.992240
Gemmatimonas aurantiaca T-27 100.0000 100.000000 1.000000
Nautilia profundicola AmH 100.0000 100.000000 1.000000
Desulfomicrobium baculatum DSM 4028 100.0000 100.000000 1.000000
Arthrobacter chlorophenolicus A6 99.9800 99.980000 0.985397
Candidatus Kinetoplastibacterium oncopeltii TCC290E 100.0000 100.000000 1.000000
Candidatus Mycoplasma haemominutum 'Birmingham 1' 100.0000 100.000000 1.000000
Streptococcus pneumoniae ATCC 700669 100.0000 100.000000 1.000000
Methylobacterium nodulans ORS 2060 99.9800 99.980000 0.985397
Listeria monocytogenes SLCC5850 100.0000 100.000000 1.000000
Mycoplasma hominis ATCC 23114 100.0000 100.000000 1.000000
Streptococcus mutans NN2025 100.0000 100.000000 1.000000
Methanocella paludicola SANAE 100.0000 100.000000 1.000000
Dehalococcoides sp. VS 100.0000 100.000000 1.000000
Coraliomargarita akajimensis DSM 45221 100.0000 100.000000 1.000000
Robiginitalea biformata HTCC2501 100.0000 100.000000 1.000000
Rhodobacter capsulatus SB 1003 100.0000 100.000000 1.000000
Streptococcus thermophilus ND03 100.0000 100.000000 1.000000
Thermoanaerobacter italicus Ab9 100.0000 100.000000 1.000000
Bacillus megaterium DSM 319 100.0000 100.000000 1.000000
Rothia mucilaginosa DY-18 99.9500 99.950000 0.971280
Xanthomonas albilineans GPE PC73 99.9400 99.940000 0.967919
Methanocaldococcus sp. FS406-22 99.9500 99.950000 0.971280
Psychroflexus torquis ATCC 700755 100.0000 100.000000 1.000000
Staphylococcus lugdunensis HKU09-01 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Typhimurium Definitive Type 104 100.0000 100.000000 1.000000
Lactococcus lactis subsp. lactis KF147 100.0000 100.000000 1.000000
Thermomonospora curvata DSM 43183 99.9800 99.980000 0.985397
Listeria seeligeri serovar 1/2b str. SLCC3954 100.0000 100.000000 1.000000
Blattabacterium sp. (Blattella germanica) str. Bge 100.0000 100.000000 1.000000
Blattabacterium sp. (Periplaneta americana) str. BPLAN 100.0000 100.000000 1.000000
Cronobacter turicensis z3032 99.9900 99.990000 0.992240
Rickettsia massiliae MTU5 96.1000 96.100000 0.886993
Rickettsia rickettsii str. 'Sheila Smith' 99.9700 99.970000 0.979928
Desulfovibrio piezophilus 100.0000 100.000000 1.000000
Shewanella sediminis HAW-EB3 99.9100 99.910000 0.961774
Nitrosopumilus maritimus SCM1 99.9400 99.940000 0.967919
Bacillus pumilus SAFR-032 99.7000 99.700000 0.939837
Brucella suis ATCC 23445 100.0000 100.000000 1.000000
Rickettsia canadensis str. McKiel 99.6900 99.690000 0.938858
Rickettsia bellii OSU 85-389 99.7700 99.770000 0.945408
Exiguobacterium sp. MH3 100.0000 100.000000 1.000000
Prochlorococcus marinus str. MIT 9211 99.8400 99.840000 0.952813
Arcobacter butzleri RM4018 99.9400 99.940000 0.967919
Escherichia coli E24377A 100.0000 100.000000 1.000000
Yersinia pestis Angola 100.0000 100.000000 1.000000
Trichoderma harzianum CBS 226.95 v1.0 2.4100 2.410000 0.036445
Caldivirga maquilingensis IC-167 99.7500 99.750000 0.943175
Staphylococcus aureus subsp. aureus USA300_TCH1516 100.0000 100.000000 1.000000
Frankia sp. EAN1pec 99.9200 99.920000 0.963395
Dinoroseobacter shibae DFL 12 99.4800 99.480000 0.928189
Methylobacterium extorquens PA1 99.9100 99.910000 0.961774
Streptococcus gordonii str. Challis substr. CH1 99.9700 99.970000 0.979928
Shewanella pealeana ATCC 700345 99.7900 99.790000 0.946909
Bartonella tribocorum CIP 105476 99.9500 99.950000 0.971280
Neisseria meningitidis 053442 99.9600 99.960000 0.975192
Chloroflexus aurantiacus J-10-fl 99.9900 99.990000 0.992240
Campylobacter concisus 13826 98.4600 98.460000 0.908917
Petrotoga mobilis SJ95 99.9000 99.900000 0.960154
Brucella canis ATCC 23365 100.0000 100.000000 1.000000
Leptosphaeria maculans 22 99.9800 99.980000 0.985397
Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980 99.9300 99.930000 0.965199
Chlamydia psittaci WS/RT/E30 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus Mu3 100.0000 100.000000 1.000000
Escherichia coli HS 100.0000 100.000000 1.000000
Prochlorococcus marinus str. MIT 9215 99.8700 99.870000 0.956117
Rickettsia akari str. Hartford 99.6200 99.620000 0.935302
Lepisosteus oculatus 76 100.0000 100.000000 1.000000
Azorhizobium caulinodans ORS 571 99.5600 99.560000 0.932358
Burkholderia multivorans ATCC 17616 100.0000 100.000000 1.000000
Mycoplasma pneumoniae M129-B7 100.0000 100.000000 1.000000
Roseiflexus castenholzii DSM 13941 99.9300 99.930000 0.965199
Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7 100.0000 100.000000 1.000000
Lactobacillus helveticus DPC 4571 100.0000 100.000000 1.000000
Kribbella flavida DSM 17836 100.0000 100.000000 1.000000
Listeria monocytogenes SLCC2376 100.0000 100.000000 1.000000
Xenorhabdus bovienii SS-2004 100.0000 100.000000 1.000000
Escherichia coli O111:H- str. 11128 100.0000 100.000000 1.000000
Streptococcus gallolyticus UCN34 100.0000 100.000000 1.000000
Streptomyces scabiei 87.22 99.9700 99.970000 0.979928
Mycobacterium tuberculosis 100.0000 100.000000 1.000000
Geodermatophilus obscurus DSM 43160 100.0000 100.000000 1.000000
Streptobacillus moniliformis DSM 12112 100.0000 100.000000 1.000000
Shewanella violacea DSS12 99.9600 99.960000 0.975192
Synechocystis sp. PCC 6803 substr. PCC-N 100.0000 100.000000 1.000000
Listeria monocytogenes SLCC7179 100.0000 100.000000 1.000000
Xylanimonas cellulosilytica DSM 15894 98.8500 98.850000 0.913676
Gardnerella vaginalis 409-05 100.0000 100.000000 1.000000
Aminobacterium colombiense DSM 12261 100.0000 100.000000 1.000000
Mycoplasma agalactiae 100.0000 100.000000 1.000000
Pectobacterium wasabiae WPP163 100.0000 100.000000 1.000000
Deferribacter desulfuricans SSM1 100.0000 100.000000 1.000000
Anas platyrhynchos 76_1.0 100.0000 100.000000 1.000000
Thermocrinis albus DSM 14484 100.0000 100.000000 1.000000
Spirosoma linguale DSM 74 100.0000 100.000000 1.000000
Bifidobacterium dentium Bd1 100.0000 100.000000 1.000000
Erwinia pyrifoliae Ep1/96 100.0000 100.000000 1.000000
Aggregatibacter actinomycetemcomitans D7S-1 100.0000 100.000000 1.000000
Thioalkalivibrio sp. K90mix 100.0000 100.000000 1.000000
Chlamydia psittaci Mat116 100.0000 100.000000 1.000000
Sulfolobus islandicus L.D.8.5 100.0000 100.000000 1.000000
Clostridium difficile CD196 100.0000 100.000000 1.000000
Archaeoglobus profundus DSM 5631 99.9500 99.950000 0.971280
Prevotella ruminicola 23 100.0000 100.000000 1.000000
Listeria monocytogenes SLCC2378 100.0000 100.000000 1.000000
Sphaerobacter thermophilus DSM 20745 100.0000 100.000000 1.000000
Shewanella baltica OS195 99.9800 99.980000 0.985397
Gluconacetobacter diazotrophicus PAl 5 99.4600 99.460000 0.927513
Streptomyces collinus Tu 365 100.0000 100.000000 1.000000
Delftia acidovorans SPH-1 99.9400 99.940000 0.967919
Serratia proteamaculans 568 99.9000 99.900000 0.960154
Sphingobium sp. SYK-6 100.0000 100.000000 1.000000
Renibacterium salmoninarum ATCC 33209 99.5700 99.570000 0.932788
Pseudomonas putida GB-1 99.9700 99.970000 0.979928
Corynebacterium urealyticum DSM 7109 100.0000 100.000000 1.000000
Leptothrix cholodnii SP-6 99.9800 99.980000 0.985397
Burkholderia cenocepacia MC0-3 99.9800 99.980000 0.985397
Francisella tularensis subsp. mediasiatica FSC147 100.0000 100.000000 1.000000
Magnaporthe poae ATCC 64411 22 100.0000 100.000000 1.000000
Acinetobacter baumannii SDF 100.0000 100.000000 1.000000
Xylella fastidiosa M23 99.9600 99.960000 0.975192
Helicobacter pylori BM012S 100.0000 100.000000 1.000000
Streptomyces griseus subsp. griseus NBRC 13350 99.9800 99.980000 0.985397
Caulobacter sp. K31 99.8900 99.890000 0.959266
Staphylococcus aureus ST228/16035 100.0000 100.000000 1.000000
Haemophilus somnus 2336 99.9100 99.910000 0.961774
Chlamydophila psittaci 6BC 100.0000 100.000000 1.000000
Anaplasma phagocytophilum str. Dog2 97.8500 97.850000 0.902480
Polynucleobacter necessarius subsp. necessarius STIR1 100.0000 100.000000 1.000000
Treponema pallidum subsp. pallidum str. Chicago 100.0000 100.000000 1.000000
Exiguobacterium sibiricum 255-15 100.0000 100.000000 1.000000
Methylobacterium sp. 4-46 99.9700 99.970000 0.979928
Acinetobacter baumannii AYE 100.0000 100.000000 1.000000
Candidatus Desulforudis audaxviator MP104C 99.8100 99.810000 0.949783
Candidatus Korarchaeum cryptofilum OPF8 99.8800 99.880000 0.957646
Methylobacterium radiotolerans JCM 2831 99.9500 99.950000 0.971280
Chamaesiphon minutus PCC 6605 100.0000 100.000000 1.000000
Sulfolobus islandicus LAL14/1 100.0000 100.000000 1.000000
Leuconostoc citreum KM20 99.8600 99.860000 0.954679
Actinobacillus pleuropneumoniae serovar 3 str. JL03 99.9500 99.950000 0.971280
Lysinibacillus sphaericus C3-41 99.8500 99.850000 0.953608
Synechococcus sp. PCC 7002 99.6900 99.690000 0.938858
Acaryochloris marina MBIC11017 99.9800 99.980000 0.985397
Thermoanaerobacter pseudethanolicus ATCC 33223 99.9800 99.980000 0.985397
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' 99.9600 99.960000 0.975192
Pseudomonas resinovorans NBRC 106553 100.0000 100.000000 1.000000
Microcystis aeruginosa NIES-843 99.6000 99.600000 0.933893
Burkholderia ambifaria MC40-6 99.9800 99.980000 0.985397
Azoarcus sp. KH32C 100.0000 100.000000 1.000000
Streptococcus pneumoniae CGSP14 99.9900 99.990000 0.992240
Mycobacterium abscessus subsp. bolletii 50594 100.0000 100.000000 1.000000
Clavibacter michiganensis subsp. sepedonicus 99.7500 99.750000 0.943175
Shewanella woodyi ATCC 51908 99.9200 99.920000 0.963395
Thiocystis violascens DSM 198 100.0000 100.000000 1.000000
Propionibacterium avidum 44067 100.0000 100.000000 1.000000
Chlamydia trachomatis 434/Bu 100.0000 100.000000 1.000000
Anaplasma phagocytophilum str. JM 100.0000 100.000000 1.000000
Caulobacter segnis ATCC 21756 100.0000 100.000000 1.000000
Sideroxydans lithotrophicus ES-1 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Typhimurium str. D23580 100.0000 100.000000 1.000000
Lactobacillus johnsonii FI9785 100.0000 100.000000 1.000000
Kyrpidia tusciae DSM 2912 100.0000 100.000000 1.000000
Thermobaculum terrenum ATCC BAA-798 100.0000 100.000000 1.000000
Vibrio cholerae IEC224 100.0000 100.000000 1.000000
Propionibacterium acnes SK137 100.0000 100.000000 1.000000
Gordonia bronchialis DSM 43247 99.9800 99.980000 0.985397
Erwinia amylovora ATCC 49946 100.0000 100.000000 1.000000
Zymomonas mobilis subsp. mobilis NCIMB 11163 100.0000 100.000000 1.000000
Salinibacter ruber M8 100.0000 100.000000 1.000000
Acidaminococcus fermentans DSM 20731 100.0000 100.000000 1.000000
Veillonella parvula DSM 2008 100.0000 100.000000 1.000000
Escherichia coli str. K-12 substr. MDS42 100.0000 100.000000 1.000000
Edwardsiella tarda EIB202 99.9800 99.980000 0.985397
Conexibacter woesei DSM 14684 100.0000 100.000000 1.000000
Denitrovibrio acetiphilus DSM 12809 100.0000 100.000000 1.000000
Sebaldella termitidis ATCC 33386 100.0000 100.000000 1.000000
Legionella longbeachae NSW150 100.0000 100.000000 1.000000
Halothiobacillus neapolitanus c2 100.0000 100.000000 1.000000
Dehalococcoides sp. GT 100.0000 100.000000 1.000000
Chlamydia trachomatis Ia/SotonIa3 100.0000 100.000000 1.000000
Streptosporangium roseum DSM 43021 99.9900 99.990000 0.992240
Klebsiella variicola At-22 100.0000 100.000000 1.000000
Halothece sp. PCC 7418 100.0000 100.000000 1.000000
Vibrio sp. Ex25 99.9900 99.990000 0.992240
Geobacillus sp. Y412MC61 100.0000 100.000000 1.000000
Citrobacter rodentium ICC168 100.0000 100.000000 1.000000
Lactobacillus crispatus ST1 100.0000 100.000000 1.000000
Ureaplasma parvum serovar 3 str. ATCC 27815 100.0000 100.000000 1.000000
Acholeplasma laidlawii PG-8A 99.9300 99.930000 0.965199
Calothrix parietina Calothrix sp. PCC 6303 100.0000 100.000000 1.000000
Mycobacterium abscessus ATCC 19977 100.0000 100.000000 1.000000
Thermoanaerobacter sp. X514 99.9600 99.960000 0.975192
Chlamydia trachomatis RC-J/971 100.0000 100.000000 1.000000
Streptococcus pneumoniae Hungary19A-6 100.0000 100.000000 1.000000
Clostridium botulinum B1 str. Okra 100.0000 100.000000 1.000000
Finegoldia magna ATCC 29328 99.9100 99.910000 0.961774
Thermoproteus neutrophilus V24Sta 99.9500 99.950000 0.971280
Propionibacterium acidipropionici ATCC 4875 100.0000 100.000000 1.000000
Opitutus terrae PB90-1 99.9600 99.960000 0.975192
Heliobacterium modesticaldum Ice1 99.9700 99.970000 0.979928
Escherichia coli SMS-3-5 100.0000 100.000000 1.000000
Shewanella halifaxensis HAW-EB4 99.8600 99.860000 0.954679
Halobacterium salinarum R1 98.1900 98.190000 0.905830
Rhizobium tropici CIAT 899 100.0000 100.000000 1.000000
Escherichia coli str. K-12 substr. DH10B 100.0000 100.000000 1.000000
Xylella fastidiosa M12 99.9800 99.980000 0.985397
Sulfobacillus acidophilus TPY 100.0000 100.000000 1.000000
Escherichia coli O104:H4 str. 2009EL-2050 100.0000 100.000000 1.000000
Francisella philomiragia subsp. philomiragia ATCC 25017 99.8300 99.830000 0.952017
Beijerinckia indica subsp. indica ATCC 9039 99.8900 99.890000 0.959266
Klebsiella pneumoniae CG43 100.0000 100.000000 1.000000
Yersinia pseudotuberculosis YPIII 100.0000 100.000000 1.000000
Bacillus amyloliquefaciens subsp. plantarum UCMB5113 100.0000 100.000000 1.000000
Clostridium botulinum A3 str. Loch Maree 100.0000 100.000000 1.000000
Cyanothece sp. ATCC 51142 99.6800 99.680000 0.938062
Mycobacterium marinum M 99.9700 99.970000 0.979928
Pseudomonas putida W619 99.9700 99.970000 0.979928
Chlamydia trachomatis L2b/UCH-1/proctitis 100.0000 100.000000 1.000000
Rickettsia rickettsii str. Iowa 99.9300 99.930000 0.965199
Salmonella enterica subsp. enterica serovar Newport str. SL254 100.0000 100.000000 1.000000
Streptococcus pneumoniae G54 100.0000 100.000000 1.000000
Burkholderia phymatum STM815 100.0000 100.000000 1.000000
Mycobacterium tuberculosis CAS/NITR204 100.0000 100.000000 1.000000
Metschnikowia bicuspidata NRRL YB-4993 v1.0 0.4100 0.410000 0.008402
Brucella abortus S19 100.0000 100.000000 1.000000
Thermotoga sp. RQ2 100.0000 100.000000 1.000000
Simiduia agarivorans SA1 = DSM 21679 100.0000 100.000000 1.000000
Lactobacillus plantarum ZJ316 100.0000 100.000000 1.000000
Treponema pallidum subsp. pallidum SS14 100.0000 100.000000 1.000000
Elusimicrobium minutum Pei191 100.0000 100.000000 1.000000
Astyanax mexicanus 76 100.0000 100.000000 1.000000
Lactobacillus casei BL23 100.0000 100.000000 1.000000
Yersinia enterocolitica subsp. palearctica Y11 100.0000 100.000000 1.000000
Sulfurihydrogenibium sp. YO3AOP1 100.0000 100.000000 1.000000
Clostridium botulinum B str. Eklund 17B 100.0000 100.000000 1.000000
Kocuria rhizophila DC2201 99.8300 99.830000 0.952017
Acinetobacter baumannii ACICU 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus ED98 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica Serovar Cubana str. CFSAN002050 100.0000 100.000000 1.000000
Listeria monocytogenes 08-5578 100.0000 100.000000 1.000000
Thermanaerovibrio acidaminovorans DSM 6589 100.0000 100.000000 1.000000
Anaplasma centrale str. Israel 100.0000 100.000000 1.000000
Thermotoga naphthophila RKU-10 100.0000 100.000000 1.000000
Dickeya dadantii Ech586 100.0000 100.000000 1.000000
Allochromatium vinosum DSM 180 99.9700 99.970000 0.979928
Lactobacillus johnsonii N6.2 100.0000 100.000000 1.000000
Stackebrandtia nassauensis DSM 44728 100.0000 100.000000 1.000000
Anaplasma marginale str. Gypsy Plains 99.9500 99.950000 0.971280
Paenibacillus sp. Y412MC10 100.0000 100.000000 1.000000
Erwinia amylovora CFBP1430 100.0000 100.000000 1.000000
Clostridium difficile R20291 100.0000 100.000000 1.000000
uncultured Sulfuricurvum sp. RIFRC-1 100.0000 100.000000 1.000000
Brachyspira pilosicoli WesB 100.0000 100.000000 1.000000
Listeria monocytogenes 08-5923 100.0000 100.000000 1.000000
Escherichia coli O55:H7 str. CB9615 100.0000 100.000000 1.000000
Aciduliprofundum boonei T469 100.0000 100.000000 1.000000
Haloterrigena turkmenica DSM 5511 100.0000 100.000000 1.000000
Streptococcus pneumoniae SPN034183 100.0000 100.000000 1.000000
Methanobrevibacter ruminantium M1 99.9500 99.950000 0.971280
Azospirillum sp. B510 100.0000 100.000000 1.000000
Mycobacterium tuberculosis str. Haarlem/NITR202 99.2300 99.230000 0.920749
Escherichia coli O26:H11 str. 11368 100.0000 100.000000 1.000000
Lactobacillus buchneri 100.0000 100.000000 1.000000
Helicobacter mustelae 12198 100.0000 100.000000 1.000000
Candidatus Riesia pediculicola USDA 100.0000 100.000000 1.000000
Phaseolus vulgaris v186 76.8500 76.850000 0.747956
Chlamydia trachomatis A2497 100.0000 100.000000 1.000000
Yersinia pestis Z176003 100.0000 100.000000 1.000000
Candidatus Puniceispirillum marinum IMCC1322 100.0000 100.000000 1.000000
Zunongwangia profunda SM-A87 99.9800 99.980000 0.985397
Streptomyces venezuelae ATCC 10712 99.9900 99.990000 0.992240
Pantoea ananatis LMG 20103 99.9800 99.980000 0.985397
Clostridiales genomosp. BVAB3 str. UPII9-5 100.0000 100.000000 1.000000
Akkermansia muciniphila ATCC BAA-835 99.9600 99.960000 0.975192
Lactobacillus fermentum IFO 3956 100.0000 100.000000 1.000000
Borrelia turicatae 91E135 99.9000 99.900000 0.960154
Mycobacterium avium subsp. paratuberculosis MAP4 100.0000 100.000000 1.000000
Escherichia coli ATCC 8739 100.0000 100.000000 1.000000
Chlorobium phaeobacteroides BS1 99.9600 99.960000 0.975192
Candidatus Nitrosoarchaeum koreensis Candidatus Nitrosopumilus koreensis AR1 100.0000 100.000000 1.000000
Neisseria gonorrhoeae NCCP11945 99.9800 99.980000 0.985397
secondary endosymbiont of Heteropsylla cubana Thao2000 100.0000 100.000000 1.000000
Yersinia pseudotuberculosis PB1/+ 100.0000 100.000000 1.000000
Methylacidiphilum infernorum V4 99.8000 99.800000 0.947980
Stenotrophomonas maltophilia K279a 99.9600 99.960000 0.975192
Propionibacterium acnes HL096PA1 100.0000 100.000000 1.000000
Nostoc punctiforme PCC 73102 99.9400 99.940000 0.967919
Bordetella avium 197N 99.7200 99.720000 0.941520
Desulfatibacillum alkenivorans AK-01 99.9400 99.940000 0.967919
Cellvibrio japonicus Ueda107 99.6800 99.680000 0.938062
Helicobacter pylori Shi470 99.9900 99.990000 0.992240
Chloroherpeton thalassium ATCC 35110 100.0000 100.000000 1.000000
Rhizobium etli CIAT 652 99.9600 99.960000 0.975192
Wolbachia endosymbiont of Culex quinquefasciatus Pel 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 100.0000 100.000000 1.000000
Pelodictyon phaeoclathratiforme BU-1 100.0000 100.000000 1.000000
Ruminococcus champanellensis 18P13 100.0000 100.000000 1.000000
Sulfolobus acidocaldarius Ron12/I 100.0000 100.000000 1.000000
Sphingobium japonicum UT26S 99.9900 99.990000 0.992240
Methanomethylovorans hollandica DSM 15978 100.0000 100.000000 1.000000
Borrelia hermsii DAH 99.8200 99.820000 0.951221
Bacillus amyloliquefaciens CC178 100.0000 100.000000 1.000000
Porphyromonas gingivalis ATCC 33277 99.9300 99.930000 0.965199
Chlamydia trachomatis A/5291 100.0000 100.000000 1.000000
Mycoplasma arthritidis 158L3-1 100.0000 100.000000 1.000000
Cupriavidus taiwanensis LMG 19424 99.9700 99.970000 0.979928
Candidatus Phytoplasma mali 99.3800 99.380000 0.924902
Geobacter lovleyi SZ 100.0000 100.000000 1.000000
Dehalobacter sp. CF 100.0000 100.000000 1.000000
Schizosaccharomyces cryophilus OY26 22 100.0000 100.000000 1.000000
Agaricus bisporus var. bisporus 99.5200 99.520000 0.930090
Vibrio sp. EJY3 100.0000 100.000000 1.000000
Aspergillus carbonarius ITEM 5010 22.9100 22.910000 0.274049
Actinidia chinensis Hongyang 2.2400 2.240000 0.034181
butyrate-producing bacterium SSC/2 100.0000 100.000000 1.000000
Rivularia sp. PCC 7116 100.0000 100.000000 1.000000
Acinetobacter baumannii BJAB0868 100.0000 100.000000 1.000000
Escherichia coli LY180 100.0000 100.000000 1.000000
Allomyces macrogynus ATCC 38327 0.0100 0.010000 0.000583
Haemophilus influenzae KR494 100.0000 100.000000 1.000000
Acropora digitifera v1.0 0.1100 0.110000 0.002928
Bacteroides uniformis 100.0000 100.000000 1.000000
Arthroderma benhamiae CBS 112371 99.8700 99.870000 0.956117
Vibrio parahaemolyticus BB22OP 100.0000 100.000000 1.000000
Aquilegia coerulea v195 7.5200 7.520000 0.100335
Acinetobacter baumannii ATCC 19606 100.0000 100.000000 1.000000
Acinetobacter calcoaceticus ruh2202 100.0000 100.000000 1.000000
Actinomyces graevenitzii C83 99.8500 99.850000 0.953608
Actinomyces odontolyticus ATCC 17982 99.4100 99.410000 0.926190
Actinomyces sp. F0330 98.5600 98.560000 0.910191
Actinomyces viscosus C505 98.4500 98.450000 0.908670
Asterochloris sp. Cgr/DA1pho v1.0 0.1700 0.170000 0.004134
Acinetobacter junii SH205 99.9500 99.950000 0.971280
Acinetobacter johnsonii SH046 99.9400 99.940000 0.967919
Acinetobacter lwoffii SH145 99.9500 99.950000 0.971280
Weissella koreensis KACC 15510 100.0000 100.000000 1.000000
Acinetobacter radioresistens SH164 100.0000 100.000000 1.000000
Acinetobacter genomosp. 13TU RUH2624 99.5200 99.520000 0.930090
Acinetobacter sp. SH024 99.9500 99.950000 0.971280
Candidatus Tremblaya phenacola PAVE 100.0000 100.000000 1.000000
Acromyrmex echinatior v3.8 82.2000 82.200000 0.786922
Treponema pedis str. T A4 100.0000 100.000000 1.000000
Stenotrophomonas maltophilia D457 100.0000 100.000000 1.000000
Helicobacter pylori UM298 100.0000 100.000000 1.000000
Oryza sativa v193 72.5200 72.520000 0.715463
Ascaris suum Victoria/Ghent 10.3800 10.380000 0.134368
Terriglobus roseus DSM 18391 100.0000 100.000000 1.000000
Stanieria cyanosphaera PCC 7437 100.0000 100.000000 1.000000
Arthrobacter sp. Rue61a 100.0000 100.000000 1.000000
Streptococcus suis A7 100.0000 100.000000 1.000000
Brachypodium distachyon 100.0000 100.000000 1.000000
Volvox carteri v199 40.4100 40.410000 0.446943
Staphylococcus aureus subsp. aureus 71193 100.0000 100.000000 1.000000
Bacillus thuringiensis Bt407 100.0000 100.000000 1.000000
Variovorax paradoxus B4 100.0000 100.000000 1.000000
Bathycoccus prasinos 99.7900 99.790000 0.946909
Staphylococcus aureus ST228/10497 100.0000 100.000000 1.000000
Mycoplasma genitalium M6282 100.0000 100.000000 1.000000
Burkholderia cepacia GG4 100.0000 100.000000 1.000000
Brassica rapa Chiifu-401 1.2 99.9800 99.980000 0.985397
Helicobacter pylori UM037 100.0000 100.000000 1.000000
Bacillus thuringiensis HD-789 100.0000 100.000000 1.000000
Myxococcus stipitatus DSM 14675 100.0000 100.000000 1.000000
Catenaria anguillulae PL171 v1.0 0.0100 0.010000 0.000583
Bacillus sp. 1NLA3E 100.0000 100.000000 1.000000
Candida dubliniensis CD36 35.2400 35.240000 0.398272
Streptococcus suis TL13 100.0000 100.000000 1.000000
Callithrix jacchus 76_3.2.1 99.9700 99.970000 0.979928
Lactococcus lactis subsp. cremoris KW2 100.0000 100.000000 1.000000
Borrelia miyamotoi LB-2001 100.0000 100.000000 1.000000
Candidatus Portiera aleyrodidarum BT-QVLC 100.0000 100.000000 1.000000
Thermodesulfobacterium sp. OPB45 100.0000 100.000000 1.000000
Cucumis sativus v122 4.1400 4.140000 0.059195
Aspergillus wentii v1.0 1.4000 1.400000 0.022853
Coccomyxa subellipsoidea sp. C-169 v2 99.6100 99.610000 0.934872
Fusobacterium nucleatum subsp. animalis 4_8 100.0000 100.000000 1.000000
Citrus clementina v165 66.0800 66.080000 0.666324
Spirochaeta africana DSM 8902 100.0000 100.000000 1.000000
Gadus morhua 76_1 16.6600 16.660000 0.205839
Zymomonas mobilis subsp. mobilis CP4 100.0000 100.000000 1.000000
Citrus sinensis v154 12.1500 12.150000 0.154733
Nostoc sp. PCC 7524 100.0000 100.000000 1.000000
Pseudanabaena sp. PCC 7367 100.0000 100.000000 1.000000
Cyanophora paradoxa 0.0100 0.010000 0.000583
Brucella ceti TE10759-12 100.0000 100.000000 1.000000
Ilumatobacter coccineus 100.0000 100.000000 1.000000
Streptococcus intermedius B196 100.0000 100.000000 1.000000
Mesorhizobium australicum WSM2073 100.0000 100.000000 1.000000
Chlamydia trachomatis L2b/Canada1 100.0000 100.000000 1.000000
candidate division SR1 bacterium RAAC1_SR1_1 0.0000 0.000000 0.000000
Staphylococcus aureus subsp. aureus 55/2053 100.0000 100.000000 1.000000
Megaselia scalaris 22 100.0000 100.000000 1.000000
Clostridium autoethanogenum DSM 10061 100.0000 100.000000 1.000000
Rhodococcus pyridinivorans SB3094 100.0000 100.000000 1.000000
Sulfolobus acidocaldarius N8 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. 08-1736 100.0000 100.000000 1.000000
Mannheimia haemolytica M42548 100.0000 100.000000 1.000000
Pythium arrhenomanes ATCC 12531 22 0.3800 0.380000 0.007937
Mycobacterium canettii CIPT 140070008 100.0000 100.000000 1.000000
Streptococcus pyogenes MGAS15252 100.0000 100.000000 1.000000
Leuconostoc carnosum JB16 100.0000 100.000000 1.000000
Enterobacter sp. R4-368 100.0000 100.000000 1.000000
Danaus plexippus OGS1.0 96.3900 96.390000 0.889586
Acetobacter pasteurianus 386B 98.4900 98.490000 0.909473
Drosophila suzukii 11.1600 11.160000 0.143388
Candidatus Carsonella ruddii DC 100.0000 100.000000 1.000000
Candidatus Saccharimonas aalborgensis 100.0000 100.000000 1.000000
Dehalococcoides mccartyi DCMB5 100.0000 100.000000 1.000000
Mannheimia haemolytica D153 100.0000 100.000000 1.000000
Staphylococcus aureus ST228/18341 100.0000 100.000000 1.000000
Coprococcus catus GD/7 100.0000 100.000000 1.000000
Pseudomonas protegens CHA0 100.0000 100.000000 1.000000
Legionella pneumophila subsp. pneumophila str. Thunder Bay 100.0000 100.000000 1.000000
Helicobacter pylori SouthAfrica20 100.0000 100.000000 1.000000
Mannheimia haemolytica D171 100.0000 100.000000 1.000000
Mycoplasma mycoides subsp. mycoides SC str. Gladysdale 100.0000 100.000000 1.000000
Entamoeba dispar 1.2 92.9800 92.980000 0.864034
Turneriella parva DSM 21527 100.0000 100.000000 1.000000
Alteromonas macleodii str. 'Ionian Sea UM7' 100.0000 100.000000 1.000000
Entamoeba invadens 1.2 19.9800 19.980000 0.242605
Halobacteroides halobius DSM 5150 100.0000 100.000000 1.000000
Vibrio cholerae LMA3984-4 100.0000 100.000000 1.000000
Roseburia hominis A2-183 100.0000 100.000000 1.000000
Amorphotheca resinae v1.0 1.0300 1.030000 0.017736
Vibrio cholerae O395 100.0000 100.000000 1.000000
Mycoplasma gallisepticum NC06_2006.080-5-2P 100.0000 100.000000 1.000000
Echinococcus granulosus 98.3300 98.330000 0.907451
Chlamydia trachomatis RC-J943 100.0000 100.000000 1.000000
Eucalyptus grandis v201 2.0000 2.000000 0.031057
Solibacillus silvestris StLB046 100.0000 100.000000 1.000000
Candidatus Carsonella ruddii CS isolate Thao2000 100.0000 100.000000 1.000000
Rickettsia slovaca str. D-CWPP 100.0000 100.000000 1.000000
Carnobacterium sp. WN1359 100.0000 100.000000 1.000000
Ectocarpus siliculosus 97.2900 97.290000 0.896532
Gluconobacter oxydans H24 100.0000 100.000000 1.000000
Liberibacter crescens BT-1 100.0000 100.000000 1.000000
Physcomitrella patens subsp. patens 22 20.1100 20.110000 0.244082
Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S 100.0000 100.000000 1.000000
Corynebacterium pseudotuberculosis 316 100.0000 100.000000 1.000000
Methanolobus psychrophilus R15 100.0000 100.000000 1.000000
Sinorhizobium meliloti GR4 100.0000 100.000000 1.000000
Didymella exigua CBS 183.55 v1.0 1.4400 1.440000 0.023438
Thermotoga maritima MSB8 99.2800 99.280000 0.922255
Chlamydia trachomatis L2b/CV204 100.0000 100.000000 1.000000
Corynebacterium pseudotuberculosis 31 100.0000 100.000000 1.000000
Corynebacterium pseudotuberculosis 3/99-5 100.0000 100.000000 1.000000
Corynebacterium pseudotuberculosis 42/02-A 100.0000 100.000000 1.000000
Corynebacterium pseudotuberculosis C231 100.0000 100.000000 1.000000
Hyphomicrobium nitrativorans NL23 100.0000 100.000000 1.000000
Chlamydia trachomatis E/SotonE8 100.0000 100.000000 1.000000
Tetragenococcus halophilus NBRC 12172 100.0000 100.000000 1.000000
Corynebacterium pseudotuberculosis CIP 52.97 100.0000 100.000000 1.000000
Corynebacterium pseudotuberculosis Cp162 100.0000 100.000000 1.000000
Blumeria graminis 22 99.6300 99.630000 0.935914
Corynebacterium pseudotuberculosis I19 100.0000 100.000000 1.000000
Oryza brachyantha 22 100.0000 100.000000 1.000000
Candidatus Nitrososphaera gargensis Ga9.2 100.0000 100.000000 1.000000
Burkholderia phenoliruptrix BR3459a 100.0000 100.000000 1.000000
Corynebacterium pseudotuberculosis P54B96 100.0000 100.000000 1.000000
Corynebacterium pseudotuberculosis PAT10 100.0000 100.000000 1.000000
Corynebacterium resistens DSM 45100 100.0000 100.000000 1.000000
Choloepus hoffmanni 76_1 16.9100 16.910000 0.208662
Mycoplasma gallisepticum CA06_2006.052-5-2P 100.0000 100.000000 1.000000
Lactobacillus plantarum 16 100.0000 100.000000 1.000000
Corynebacterium ulcerans 0102 100.0000 100.000000 1.000000
Streptococcus constellatus subsp. pharyngis C1050 100.0000 100.000000 1.000000
Campylobacter coli CVM N29710 100.0000 100.000000 1.000000
Staphylococcus warneri SG1 100.0000 100.000000 1.000000
Streptococcus agalactiae ILRI005 100.0000 100.000000 1.000000
Corynebacterium ulcerans 809 100.0000 100.000000 1.000000
Sinorhizobium fredii HH103 100.0000 100.000000 1.000000
Bacillus thuringiensis MC28 99.8100 99.810000 0.949783
Bacillus infantis NRRL B-14911 100.0000 100.000000 1.000000
Lactococcus lactis subsp. lactis IO-1 100.0000 100.000000 1.000000
Corynebacterium ulcerans BR-AD22 100.0000 100.000000 1.000000
Corynebacterium variabile DSM 44702 100.0000 100.000000 1.000000
Galerina marginata v1.0 0.3600 0.360000 0.007505
Archaeoglobus sulfaticallidus PM70-1 100.0000 100.000000 1.000000
Raoultella ornithinolytica B6 100.0000 100.000000 1.000000
Cronobacter sakazakii ES15 100.0000 100.000000 1.000000
Yersinia pestis D182038 100.0000 100.000000 1.000000
Bacillus subtilis PY79 100.0000 100.000000 1.000000
Riemerella anatipestifer ATCC 11845 = DSM 15868 100.0000 100.000000 1.000000
Cupriavidus necator N-1 99.9700 99.970000 0.979928
Aspergillus versicolor v1.0 0.6700 0.670000 0.012362
Guillardia theta CCMP2712 v1.0 98.7900 98.790000 0.912930
Staphylococcus aureus CA-347 100.0000 100.000000 1.000000
Cyclobacterium marinum DSM 745 100.0000 100.000000 1.000000
Dechlorosoma suillum PS 100.0000 100.000000 1.000000
Streptomyces cattleya NRRL 8057 = DSM 46488 100.0000 100.000000 1.000000
Deinococcus gobiensis I-0 100.0000 100.000000 1.000000
Desulfitobacterium dehalogenans ATCC 51507 100.0000 100.000000 1.000000
Cyanidioschyzon merolae strain 10D 22 95.2300 95.230000 0.880294
Xanthomonas axonopodis Xac29-1 100.0000 100.000000 1.000000
Geitlerinema sp. PCC 7407 100.0000 100.000000 1.000000
Desulfomonile tiedjei DSM 6799 100.0000 100.000000 1.000000
Streptococcus agalactiae ILRI112 100.0000 100.000000 1.000000
Streptomyces fulvissimus DSM 40593 100.0000 100.000000 1.000000
Corynebacterium terpenotabidum Y-11 100.0000 100.000000 1.000000
Candidatus Portiera aleyrodidarum BT-B-HRs 100.0000 100.000000 1.000000
Heterocephalus glaber v1.7-2 94.7000 94.700000 0.875953
Wolbachia endosymbiont of Onchocerca ochengi str. Adamawa_Cameroon 100.0000 100.000000 1.000000
Desulfosporosinus acidiphilus SJ4 100.0000 100.000000 1.000000
Burkholderia pseudomallei MSHR305 100.0000 100.000000 1.000000
Desulfosporosinus orientis DSM 765 100.0000 100.000000 1.000000
Aspergillus sydowii v1.0 0.7800 0.780000 0.014092
Heliconius melpomene 4.1500 4.150000 0.059407
Heliconius numata 0.5800 0.580000 0.010971
Desulfovibrio africanus str. Walvis Bay 99.9700 99.970000 0.979928
Bacillus amyloliquefaciens subsp. plantarum AS43.3 100.0000 100.000000 1.000000
Hymenolepis microstoma 99.7600 99.760000 0.944521
Desulfovibrio desulfuricans ND132 100.0000 100.000000 1.000000
Streptococcus thermophilus JIM 8232 100.0000 100.000000 1.000000
Desulfovibrio vulgaris RCH1 100.0000 100.000000 1.000000
Desulfurococcus fermentans DSM 16532 100.0000 100.000000 1.000000
Edwardsiella tarda FL6-60 99.9900 99.990000 0.992240
Rickettsia prowazekii str. NMRC Madrid E 100.0000 100.000000 1.000000
Chlamydia psittaci WC 100.0000 100.000000 1.000000
Sporisorium reilianum 22 100.0000 100.000000 1.000000
Eggerthella sp. YY7918 100.0000 100.000000 1.000000
Enterobacter aerogenes KCTC 2190 100.0000 100.000000 1.000000
Listeria monocytogenes N53-1 100.0000 100.000000 1.000000
Enterobacter asburiae LF7a 100.0000 100.000000 1.000000
Pseudomonas monteilii SB3101 100.0000 100.000000 1.000000
Thioflavicoccus mobilis 8321 100.0000 100.000000 1.000000
Enterobacter cloacae subsp. dissolvens SDM 100.0000 100.000000 1.000000
Anaplasma phagocytophilum str. HZ2 100.0000 100.000000 1.000000
Helicobacter pylori UM032 100.0000 100.000000 1.000000
Enterobacter cloacae EcWSU1 100.0000 100.000000 1.000000
Streptococcus gallolyticus subsp. gallolyticus ATCC 43143 100.0000 100.000000 1.000000
Enterococcus faecalis 62 100.0000 100.000000 1.000000
Enterococcus faecalis D32 100.0000 100.000000 1.000000
Enterococcus faecalis OG1RF 100.0000 100.000000 1.000000
Enterococcus faecium Aus0004 100.0000 100.000000 1.000000
Ichthyophthirius multifiliis strain G5 100.0000 100.000000 1.000000
Streptomyces hygroscopicus subsp. jinggangensis 5008 100.0000 100.000000 1.000000
Staphylococcus aureus ST228/15532 100.0000 100.000000 1.000000
Blattabacterium sp. (Blatta orientalis) Blattabacterium sp. (Blatta orientalis) str. Tarazona 100.0000 100.000000 1.000000
Mycobacterium kansasii ATCC 12478 100.0000 100.000000 1.000000
Enterococcus faecium DO 100.0000 100.000000 1.000000
Enterococcus hirae ATCC 9790 99.9900 99.990000 0.992240
Erwinia sp. Ejp617 100.0000 100.000000 1.000000
Synechocystis sp. PCC 6803 99.9500 99.950000 0.971280
Erwinia pyrifoliae DSM 12163 99.9900 99.990000 0.992240
Ruminococcus sp. 100.0000 100.000000 1.000000
Actinoplanes sp. N902-109 100.0000 100.000000 1.000000
Candidatus Blochmannia chromaiodes str. 640 100.0000 100.000000 1.000000
Escherichia blattae DSM 4481 100.0000 100.000000 1.000000
Bifidobacterium breve UCC2003 100.0000 100.000000 1.000000
Campylobacter coli 76339 100.0000 100.000000 1.000000
Escherichia coli 042 100.0000 100.000000 1.000000
Brachyspira pilosicoli B2904 100.0000 100.000000 1.000000
Escherichia coli ABU 83972 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. RKS5078 100.0000 100.000000 1.000000
Campylobacter jejuni Waterborne C.jejuni Outbreak 100.0000 100.000000 1.000000
Escherichia coli BL21(DE3) 100.0000 100.000000 1.000000
Escherichia coli str. 'clone D i14' 100.0000 100.000000 1.000000
Chlamydia psittaci GR9 100.0000 100.000000 1.000000
Pseudomonas fluorescens R124 88.4900 88.490000 0.831925
Escherichia coli str. 'clone D i2' 100.0000 100.000000 1.000000
Escherichia coli DH1 100.0000 100.000000 1.000000
Shewanella baltica OS117 100.0000 100.000000 1.000000
Escherichia coli ETEC H10407 100.0000 100.000000 1.000000
Escherichia coli IHE3034 100.0000 100.000000 1.000000
Microcoleus sp. PCC 7113 100.0000 100.000000 1.000000
Hydrogenobaculum sp. SN 100.0000 100.000000 1.000000
Staphylococcus pasteuri SP1 100.0000 100.000000 1.000000
Acinetobacter baumannii TYTH-1 100.0000 100.000000 1.000000
Escherichia coli KO11FL 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Gallinarum/pullorum str. CDC1983-67 100.0000 100.000000 1.000000
Cochliobolus lunatus m118 v2.0 4.6900 4.690000 0.066089
Rhizobium etli bv. mimosae str. Mim1 100.0000 100.000000 1.000000
Sphingomonas sp. MM-1 100.0000 100.000000 1.000000
Escherichia coli LF82 100.0000 100.000000 1.000000
Chlamydia trachomatis RC-F69 100.0000 100.000000 1.000000
Streptomyces bingchenggensis BCW-1 100.0000 100.000000 1.000000
Escherichia coli NA114 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus ED133 100.0000 100.000000 1.000000
Listeria monocytogenes SLCC2479 100.0000 100.000000 1.000000
Escherichia coli O55:H7 str. RM12579 100.0000 100.000000 1.000000
Scleroderma citrinum Foug A v1.0 0.3700 0.370000 0.007721
Staphylococcus aureus subsp. aureus TW20 100.0000 100.000000 1.000000
Escherichia coli O7:K1 str. CE10 100.0000 100.000000 1.000000
Streptococcus mutans GS-5 100.0000 100.000000 1.000000
Chlamydia psittaci CP3 100.0000 100.000000 1.000000
Aspergillus glaucus 1.6200 1.620000 0.025746
Escherichia coli O83:H1 str. NRG 857C 100.0000 100.000000 1.000000
Escherichia coli P12b 100.0000 100.000000 1.000000
Escherichia coli SE15 100.0000 100.000000 1.000000
Treponema paraluiscuniculi Cuniculi A 100.0000 100.000000 1.000000
Fusobacterium nucleatum subsp. vincentii 3_1_36A2 100.0000 100.000000 1.000000
Fusobacterium nucleatum subsp. polymorphum ATCC 10953 100.0000 100.000000 1.000000
Escherichia coli UM146 100.0000 100.000000 1.000000
Streptococcus suis SC070731 100.0000 100.000000 1.000000
Chlamydia trachomatis L2b/8200/07 100.0000 100.000000 1.000000
Chlamydia trachomatis RC-L2(s)/3 100.0000 100.000000 1.000000
Escherichia coli UMNK88 100.0000 100.000000 1.000000
Candidatus Carsonella ruddii CE isolate Thao2000 100.0000 100.000000 1.000000
Mycoplasma hyopneumoniae 7422 100.0000 100.000000 1.000000
Serratia marcescens FGI94 100.0000 100.000000 1.000000
Escherichia coli O104:H4 str. 2011C-3493 100.0000 100.000000 1.000000
Escherichia coli W 100.0000 100.000000 1.000000
Streptococcus lutetiensis 033 100.0000 100.000000 1.000000
Escherichia coli Xuzhou21 100.0000 100.000000 1.000000
Aureobasidium pullulans var. subglaciale EXF-2481 v1.0 0.8500 0.850000 0.015142
Leishmania mexicana 2.4 90.2400 90.240000 0.844611
Fervidicoccus fontis Kam940 100.0000 100.000000 1.000000
Panicum virgatum v202 4.0500 4.050000 0.057743
Fervidobacterium pennivorans DSM 9078 100.0000 100.000000 1.000000
Mycobacterium smegmatis JS623 100.0000 100.000000 1.000000
beta proteobacterium CB 99.9500 99.950000 0.971280
Latimeria chalumnae 76_1 99.9900 99.990000 0.992240
Fibrobacter succinogenes subsp. succinogenes S85 99.9700 99.970000 0.979928
Candidatus Carsonella ruddii PC isolate NHV 100.0000 100.000000 1.000000
Bifidobacterium asteroides PRL2011 100.0000 100.000000 1.000000
Thermoanaerobacterium saccharolyticum JW/SL-YS485 100.0000 100.000000 1.000000
Azotobacter vinelandii CA 100.0000 100.000000 1.000000
Filifactor alocis ATCC 35896 100.0000 100.000000 1.000000
Flavobacterium branchiophilum FL-15 100.0000 100.000000 1.000000
Streptomyces davawensis JCM 4913 100.0000 100.000000 1.000000
Hydrogenobaculum sp. HO 100.0000 100.000000 1.000000
Flavobacterium columnare ATCC 49512 100.0000 100.000000 1.000000
Flavobacterium indicum GPTSA100-9 100.0000 100.000000 1.000000
Flexibacter litoralis DSM 6794 100.0000 100.000000 1.000000
Flexistipes sinusarabici DSM 4947 100.0000 100.000000 1.000000
Staphylococcus lugdunensis N920143 100.0000 100.000000 1.000000
Pseudomonas stutzeri RCH2 100.0000 100.000000 1.000000
Francisella cf. novicida 3523 100.0000 100.000000 1.000000
Manihot esculenta v147 5.8100 5.810000 0.079845
Mycoplasma gallisepticum NC08_2008.031-4-3P 100.0000 100.000000 1.000000
Mimulus guttatus v140 96.0300 96.030000 0.886360
Meloidogyne incognita 0.9100 0.910000 0.016160
Francisella cf. novicida Fx1 100.0000 100.000000 1.000000
Francisella noatunensis subsp. orientalis str. Toba 04 100.0000 100.000000 1.000000
Francisella tularensis subsp. tularensis NE061598 100.0000 100.000000 1.000000
Meleagris gallopavo 76_2 100.0000 100.000000 1.000000
Chlamydia trachomatis IU888 100.0000 100.000000 1.000000
Octadecabacter antarcticus 307 100.0000 100.000000 1.000000
Francisella tularensis subsp. tularensis TI0902 100.0000 100.000000 1.000000
Francisella tularensis subsp. tularensis TIGB03 100.0000 100.000000 1.000000
Shewanella putrefaciens 200 100.0000 100.000000 1.000000
Francisella noatunensis subsp. orientalis LADL--07-285A 100.0000 100.000000 1.000000
Francisella sp. TX077308 100.0000 100.000000 1.000000
Frankia symbiont of Datisca glomerata 100.0000 100.000000 1.000000
Clostridium acidurici 9a 100.0000 100.000000 1.000000
Musa balbisiana 2.9900 2.990000 0.044254
Chlamydia trachomatis E/Bour 100.0000 100.000000 1.000000
Frateuria aurantia DSM 6220 100.0000 100.000000 1.000000
Gardnerella vaginalis HMP9231 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus MSHR1132 100.0000 100.000000 1.000000
Taylorella equigenitalis 14/56 100.0000 100.000000 1.000000
Meloidogyne hapla 1.2700 1.270000 0.021158
Geobacillus thermoglucosidasius C56-YS93 100.0000 100.000000 1.000000
Listeria monocytogenes L312 100.0000 100.000000 1.000000
Aciduliprofundum sp. MAR08-339 100.0000 100.000000 1.000000
Escherichia coli DH1 100.0000 100.000000 1.000000
Apiospora montagnei NRRL 25634 v1.0 1.1500 1.150000 0.019402
Mustela putorius furo 76_1.0 99.9900 99.990000 0.992240
Geobacillus thermoleovorans CCB_US3_UF5 100.0000 100.000000 1.000000
Bacillus amyloliquefaciens LFB112 100.0000 100.000000 1.000000
Mortierella verticillata NRRL 6337 0.1000 0.100000 0.002621
Streptococcus anginosus C1051 100.0000 100.000000 1.000000
Desulfosporosinus meridiei DSM 13257 100.0000 100.000000 1.000000
Geobacter sulfurreducens KN400 100.0000 100.000000 1.000000
Shewanella baltica OS678 100.0000 100.000000 1.000000
Neospora caninum Nc-Liverpool 6.2 97.6600 97.660000 0.900080
Oryza barthii 22 25.3600 25.360000 0.299730
Arcobacter butzleri 7h1h 100.0000 100.000000 1.000000
Glaciecola nitratireducens FR1064 100.0000 100.000000 1.000000
Echinicola vietnamensis DSM 17526 100.0000 100.000000 1.000000
Pseudomonas poae RE*1-1-14 100.0000 100.000000 1.000000
Cronobacter sakazakii CMCC 45402 100.0000 100.000000 1.000000
Gluconacetobacter xylinus NBRC 3288 100.0000 100.000000 1.000000
Piloderma croceum F 1598 v1.0 0.1900 0.190000 0.004658
Chlamydia trachomatis K/SotonK1 100.0000 100.000000 1.000000
Gordonia polyisoprenivorans VH2 100.0000 100.000000 1.000000
Xanthomonas campestris pv. raphani 756C 100.0000 100.000000 1.000000
Prevotella sp. oral taxon 299 str. F0039 100.0000 100.000000 1.000000
Nomascus leucogenys 76_1.0 100.0000 100.000000 1.000000
Bibersteinia trehalosi USDA-ARS-USMARC-192 100.0000 100.000000 1.000000
Mycoplasma genitalium M6320 100.0000 100.000000 1.000000
Granulicella mallensis MP5ACTX8 100.0000 100.000000 1.000000
Haemophilus influenzae 10810 99.9900 99.990000 0.992240
Haemophilus influenzae R2846 100.0000 100.000000 1.000000
Haemophilus influenzae R2866 100.0000 100.000000 1.000000
Haemophilus parainfluenzae T3T1 99.9800 99.980000 0.985397
Thalassolituus oleivorans MIL-1 100.0000 100.000000 1.000000
Halanaerobium praevalens DSM 2228 100.0000 100.000000 1.000000
Bacillus subtilis QB928 100.0000 100.000000 1.000000
Haloarcula hispanica ATCC 33960 100.0000 100.000000 1.000000
candidate division WWE3 bacterium RAAC2_WWE3_1 100.0000 100.000000 1.000000
Halobacillus halophilus DSM 2266 99.7700 99.770000 0.945408
Streptococcus constellatus subsp. pharyngis C818 100.0000 100.000000 1.000000
Haloferax mediterranei ATCC 33500 100.0000 100.000000 1.000000
halophilic archaeon DL31 100.0000 100.000000 1.000000
Pectobacterium carotovorum subsp. carotovorum PCC21 100.0000 100.000000 1.000000
Thermococcus litoralis DSM 5473 99.9600 99.960000 0.975192
Spiroplasma taiwanense CT-1 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus LGA251 100.0000 100.000000 1.000000
Halopiger xanaduensis SH-6 100.0000 100.000000 1.000000
Bacillus thuringiensis serovar kurstaki str. HD73 100.0000 100.000000 1.000000
Streptococcus intermedius JTH08 100.0000 100.000000 1.000000
Haloquadratum walsbyi C23 99.9400 99.940000 0.967919
Bacillus anthracis str. A2012 100.0000 100.000000 1.000000
Helicobacter bizzozeronii CIII-1 99.9500 99.950000 0.971280
Edwardsiella tarda C07-087 100.0000 100.000000 1.000000
Oryza glaberrima 99.7500 99.750000 0.943175
Helicobacter cetorum MIT 00-7128 100.0000 100.000000 1.000000
Helicobacter cetorum MIT 99-5656 100.0000 100.000000 1.000000
Rickettsia typhi str. B9991CWPP 100.0000 100.000000 1.000000
Corynebacterium glutamicum SCgG2 100.0000 100.000000 1.000000
Lactobacillus casei LOCK919 100.0000 100.000000 1.000000
Oreochromis niloticus 76_1.0 99.9900 99.990000 0.992240
Bacillus thuringiensis serovar thuringiensis str. IS5056 100.0000 100.000000 1.000000
Helicobacter cinaedi PAGU611 100.0000 100.000000 1.000000
Dehalobacter sp. DCA 100.0000 100.000000 1.000000
Rhodococcus erythropolis CCM2595 100.0000 100.000000 1.000000
Aegilops tauschii 22 100.0000 100.000000 1.000000
Helicobacter pylori 2017 100.0000 100.000000 1.000000
Helicobacter pylori 2018 100.0000 100.000000 1.000000
Cronartium quercuum f. sp. fusiforme G11 v1.0 0.1400 0.140000 0.003577
Helicobacter pylori 35A 100.0000 100.000000 1.000000
Helicobacter pylori 51 100.0000 100.000000 1.000000
Helicobacter pylori 83 100.0000 100.000000 1.000000
Ailuropoda melanoleuca 76_1 100.0000 100.000000 1.000000
Penicillium chrysogenum Wisconsin 54-1255 98.1800 98.180000 0.905584
Zasmidium cellare ATCC 36951 v1.0 0.6300 0.630000 0.011683
Prunus persica v139 99.0300 99.030000 0.916371
Helicobacter pylori 908 100.0000 100.000000 1.000000
Penicillium marneffei ATCC 18224 99.9500 99.950000 0.971280
Streptococcus suis GZ1 100.0000 100.000000 1.000000
Pleurotus ostreatus 1.1400 1.140000 0.019187
Pichia pastoris GS115 99.9900 99.990000 0.992240
Proterospongia sp. ATCC 50818 55.5300 55.530000 0.580449
Coprococcus sp. ART55/1 100.0000 100.000000 1.000000
Streptococcus pneumoniae A026 100.0000 100.000000 1.000000
Helicobacter pylori Cuz20 100.0000 100.000000 1.000000
Helicobacter pylori ELS37 100.0000 100.000000 1.000000
Phyllostachys heterocycla var. pubescens 3.6400 3.640000 0.052695
Spiroplasma apis B31 100.0000 100.000000 1.000000
Helicobacter pylori F16 100.0000 100.000000 1.000000
Helicobacter pylori F30 100.0000 100.000000 1.000000
Petromyzon marinus 76_7.0 99.9800 99.980000 0.985397
Perkinsus marinus ATCC 50983 100.0000 100.000000 1.000000
Porphyridium purpureum 02_2012 0.0000 0.000000 0.000000
Picea abies 3.2100 3.210000 0.047112
Pinus taeda 0.8300 0.830000 0.014803
Ficedula albicollis 76_1.0 100.0000 100.000000 1.000000
Helicobacter pylori F32 100.0000 100.000000 1.000000
Pelodiscus sinensis 76_1.0 100.0000 100.000000 1.000000
Pythium ultimum v1.7-2 100.0000 100.000000 1.000000
Helicobacter pylori F57 100.0000 100.000000 1.000000
Kinetoplastibacterium blastocrithidii Candidatus (ex Strigomonas culicis) 100.0000 100.000000 1.000000
Helicobacter pylori Gambia94/24 100.0000 100.000000 1.000000
Helicobacter pylori HUP-B14 100.0000 100.000000 1.000000
Mycoplasma ovis str. Michigan 100.0000 100.000000 1.000000
Helicobacter pylori India7 100.0000 100.000000 1.000000
Spiribacter sp. UAH-SP71 100.0000 100.000000 1.000000
Clostridium saccharobutylicum DSM 13864 100.0000 100.000000 1.000000
Helicobacter pylori Lithuania75 100.0000 100.000000 1.000000
Treponema pallidum subsp. pertenue str. Gauthier 100.0000 100.000000 1.000000
Helicobacter pylori PeCan18 100.0000 100.000000 1.000000
Helicobacter pylori Puno120 100.0000 100.000000 1.000000
Bordetella parapertussis Bpp5 100.0000 100.000000 1.000000
Chlamydia trachomatis RC-J(s)/122 100.0000 100.000000 1.000000
Helicobacter pylori Puno135 100.0000 100.000000 1.000000
Alteromonas macleodii str. 'Ionian Sea UM4b' 100.0000 100.000000 1.000000
Streptococcus pyogenes HSC5 100.0000 100.000000 1.000000
Shigella sonnei 53G 99.9800 99.980000 0.985397
Achromobacter xylosoxidans 100.0000 100.000000 1.000000
Mycobacterium tuberculosis str. Erdman = ATCC 35801 100.0000 100.000000 1.000000
Streptococcus anginosus C238 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus SA957 100.0000 100.000000 1.000000
Riemerella anatipestifer RA-CH-1 99.9700 99.970000 0.979928
Lactobacillus fermentum F-6 100.0000 100.000000 1.000000
Helicobacter pylori Sat464 99.9900 99.990000 0.992240
Helicobacter pylori Shi112 100.0000 100.000000 1.000000
Oryza meridionalis 22 6.9900 6.990000 0.094007
Methylocystis sp. SC2 100.0000 100.000000 1.000000
Enterococcus faecium Aus0085 100.0000 100.000000 1.000000
Bacillus subtilis subsp. subtilis str. BSP1 99.9900 99.990000 0.992240
Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) 100.0000 100.000000 1.000000
Helicobacter pylori Shi169 100.0000 100.000000 1.000000
Trichoderma asperellum CBS 433.97 v1.0 2.3100 2.310000 0.035130
Pseudomonas aeruginosa MTB-1 100.0000 100.000000 1.000000
Alistipes shahii WAL 8301 100.0000 100.000000 1.000000
Helicobacter pylori Shi417 100.0000 100.000000 1.000000
Borrelia valaisiana VS116 100.0000 100.000000 1.000000
Helicobacter pylori SNT49 100.0000 100.000000 1.000000
Helicobacter pylori SouthAfrica7 100.0000 100.000000 1.000000
Sinorhizobium meliloti BL225C 100.0000 100.000000 1.000000
Mycoplasma putrefaciens Mput9231 100.0000 100.000000 1.000000
Taylorella asinigenitalis MCE3 100.0000 100.000000 1.000000
Helicobacter pylori 52 100.0000 100.000000 1.000000
Oligotropha carboxidovorans OM5 100.0000 100.000000 1.000000
Helicobacter pylori v225d 100.0000 100.000000 1.000000
Helicobacter pylori XZ274 100.0000 100.000000 1.000000
Hydrogenobacter thermophilus TK-6 100.0000 100.000000 1.000000
Hyphomicrobium sp. MC1 100.0000 100.000000 1.000000
Tannerella forsythia ATCC 43037 100.0000 100.000000 1.000000
Ignavibacterium album JCM 16511 100.0000 100.000000 1.000000
Desulfobacula toluolica Tol2 100.0000 100.000000 1.000000
Ketogulonigenium vulgarum WSH-001 100.0000 100.000000 1.000000
Polaribacter sp. MED152 100.0000 100.000000 1.000000
Oscillatoria acuminata PCC 6304 100.0000 100.000000 1.000000
Aspergillus zonatus v1.0 99.0600 99.060000 0.916927
Gordonia sp. KTR9 99.1600 99.160000 0.919024
Kitasatospora setae KM-6054 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Typhimurium str. 798 100.0000 100.000000 1.000000
Klebsiella oxytoca E718 100.0000 100.000000 1.000000
Chroococcidiopsis thermalis PCC 7203 100.0000 100.000000 1.000000
Staphylococcus aureus ST228/16125 100.0000 100.000000 1.000000
Klebsiella oxytoca KCTC 1686 100.0000 100.000000 1.000000
Chlamydia trachomatis RC-L2/55 100.0000 100.000000 1.000000
Candidatus Liberibacter asiaticus str. gxpsy 100.0000 100.000000 1.000000
Daldinia eschscholzii EC12 v1.0 1.6200 1.620000 0.025746
Streptomyces cattleya NRRL 8057 = DSM 46488 100.0000 100.000000 1.000000
Candidatus Saccharibacteria bacterium RAAC3_TM7_1 100.0000 100.000000 1.000000
Nonlabens dokdonensis DSW-6 100.0000 100.000000 1.000000
Klebsiella pneumoniae subsp. pneumoniae HS11286 100.0000 100.000000 1.000000
Anabaena cylindrica PCC 7122 100.0000 100.000000 1.000000
Klebsiella pneumoniae KCTC 2242 100.0000 100.000000 1.000000
Sphaeroforma arctica JP610 0.0300 0.030000 0.001107
Legionella pneumophila subsp. pneumophila LPE509 100.0000 100.000000 1.000000
Saccoglossus kowalevskii v3.0 4.0700 4.070000 0.058076
Serpula lacrymans var. lacrymans S7.9 99.5200 99.520000 0.930090
Chlamydia pecorum W73 100.0000 100.000000 1.000000
Sus scrofa 76_10.2 99.4400 99.440000 0.927112
Sporotrichum thermophile ATCC 42464 55.4400 55.440000 0.579614
Chlamydia trachomatis L2/434/Bu(i) 99.9800 99.980000 0.985397
Saccharomyces cerevisiae AWRI1631 98.0700 98.070000 0.904244
Escherichia coli APEC O78 100.0000 100.000000 1.000000
Saccharomyces cerevisiae AWRI796 90.1800 90.180000 0.843938
Lacinutrix sp. 5H-3-7-4 100.0000 100.000000 1.000000
Pseudomonas putida NBRC 14164 100.0000 100.000000 1.000000
Saccharomyces cerevisiae CBS7960 93.1300 93.130000 0.865106
Saccharomyces cerevisiae CLIB215 94.1600 94.160000 0.872086
Lactobacillus amylovorus GRL1118 100.0000 100.000000 1.000000
Saccharomyces cerevisiae CLIB324 92.5300 92.530000 0.860448
Saccharomyces cerevisiae CLIB382 90.2000 90.200000 0.844162
Saccharomyces cerevisiae FL100 92.8300 92.830000 0.862870
Streptococcus sp. I-P16 100.0000 100.000000 1.000000
Saccharomyces cerevisiae FostersB 69.1900 69.190000 0.690313
Setaria italica v164 100.0000 100.000000 1.000000
Onchocerca volvulus 22 3.1600 3.160000 0.046413
Saccharomyces cerevisiae FostersO 72.8000 72.800000 0.717898
Hyphopichia burtonii NRRL Y-1933 v1.0 0.1800 0.180000 0.004350
Tistrella mobilis KA081020-065 100.0000 100.000000 1.000000
Saccharomyces cerevisiae JAY291 98.2600 98.260000 0.906549
Saccharomyces cerevisiae LalvinQA23 84.7300 84.730000 0.804864
Saccharomyces cerevisiae M22 94.7600 94.760000 0.876433
Blattabacterium sp. (Nauphoeta cinerea) 100.0000 100.000000 1.000000
Lactobacillus casei BD-II 100.0000 100.000000 1.000000
Saccharomyces cerevisiae PW5 80.9800 80.980000 0.778212
Saccharomyces cerevisiae RM11-1a 98.6500 98.650000 0.911403
Lactobacillus casei LC2W 100.0000 100.000000 1.000000
Saccharomyces cerevisiae Sigma1278b 95.7100 95.710000 0.883845
Lactobacillus delbrueckii subsp. bulgaricus 2038 100.0000 100.000000 1.000000
Saccharomyces cerevisiae T7 87.7400 87.740000 0.826425
Saccharomyces cerevisiae T73 92.6600 92.660000 0.861575
Saccharomyces cerevisiae UC5 89.4500 89.450000 0.838712
Enterococcus mundtii QU 25 100.0000 100.000000 1.000000
Pseudomonas aeruginosa SCV20265 100.0000 100.000000 1.000000
Saccharomyces cerevisiae VL3 88.6600 88.660000 0.833248
Saccharomyces cerevisiae W303 97.5000 97.500000 0.898328
Saccharomyces cerevisiae Vin13 84.4300 84.430000 0.802713
Saccharomyces cerevisiae YJM269 85.1500 85.150000 0.807925
Lactobacillus fermentum CECT 5716 99.0800 99.080000 0.917328
Saccharomyces cerevisiae Y10 83.3100 83.310000 0.794809
Saccharomyces cerevisiae YJM789 98.5800 98.580000 0.910685
Saccharomyces cerevisiae YPS163 88.4900 88.490000 0.831925
Lactobacillus helveticus H10 100.0000 100.000000 1.000000
Lactobacillus johnsonii DPC 6026 100.0000 100.000000 1.000000
secondary endosymbiont of Ctenarytaina eucalypti 100.0000 100.000000 1.000000
Lactobacillus reuteri SD2112 100.0000 100.000000 1.000000
Thioalkalivibrio nitratireducens DSM 14787 100.0000 100.000000 1.000000
Trypanosoma vivax 95.1500 95.150000 0.879594
Lactobacillus rhamnosus ATCC 8530 100.0000 100.000000 1.000000
Natronococcus occultus SP4 100.0000 100.000000 1.000000
Lactobacillus rhamnosus LOCK908 100.0000 100.000000 1.000000
Cylindrospermum stagnale PCC 7417 100.0000 100.000000 1.000000
Bordetella bronchiseptica 253 100.0000 100.000000 1.000000
Leptolyngbya sp. PCC 7376 100.0000 100.000000 1.000000
Tuber melanosporum Vittad 58.8700 58.870000 0.608273
Roseburia intestinalis XB6B4 100.0000 100.000000 1.000000
Trichophyton tonsurans CBS 112818 99.9700 99.970000 0.979928
Enterococcus sp. 7L76 100.0000 100.000000 1.000000
Trichophyton rubrum CBS 118892 100.0000 100.000000 1.000000
Thielavia terrestris NRRL 8126 57.8500 57.850000 0.599825
Trichophyton verrucosum HKI 0517 99.8600 99.860000 0.954679
Lactobacillus reuteri I5007 100.0000 100.000000 1.000000
Salinarchaeum sp. Harcht-Bsk1 100.0000 100.000000 1.000000
Yersinia pestis D106004 100.0000 100.000000 1.000000
Trypanosoma brucei TREU927 v4.1 89.0300 89.030000 0.835816
Trypanosoma brucei Lister 427 v4.1 41.0200 41.020000 0.452617
Theobroma cacao B97-61/B2 v1 1.2600 1.260000 0.020943
Achromobacter xylosoxidans NBRC 15126 = ATCC 27061 100.0000 100.000000 1.000000
Sarcophilus harrisii 76_7.0 100.0000 100.000000 1.000000
Rickettsia rickettsii str. Hlp#2 100.0000 100.000000 1.000000
Lactobacillus rhamnosus GG 100.0000 100.000000 1.000000
Lactobacillus ruminis ATCC 27782 100.0000 100.000000 1.000000
Lactobacillus salivarius CECT 5713 99.1900 99.190000 0.919580
Lactobacillus sanfranciscensis TMW 1.1304 100.0000 100.000000 1.000000
Clavibacter michiganensis subsp. nebraskensis NCPPB 2581 99.9700 99.970000 0.979928
Taenia solium 0.0400 0.040000 0.001507
Gloeobacter kilaueensis Gloeobacter sp. JS 100.0000 100.000000 1.000000
Candidatus Kinetoplastibacterium galatii TCC219 100.0000 100.000000 1.000000
Thecamonas trahens ATCC 50062 0.0000 0.000000 0.000000
Tetranychus urticae 98.5600 98.560000 0.910191
Zymomonas mobilis subsp. pomaceae ATCC 29192 100.0000 100.000000 1.000000
Chlamydia trachomatis L2b/LST 100.0000 100.000000 1.000000
Lactococcus garvieae ATCC 49156 100.0000 100.000000 1.000000
Lactococcus garvieae Lg2 100.0000 100.000000 1.000000
Lactococcus lactis subsp. cremoris A76 100.0000 100.000000 1.000000
Anabaena sp. 90 100.0000 100.000000 1.000000
Bacteroides xylanisolvens XB1A 100.0000 100.000000 1.000000
Lactococcus lactis subsp. cremoris NZ9000 100.0000 100.000000 1.000000
Triticum aestivum 22 99.2300 99.230000 0.920749
Lactococcus lactis subsp. lactis CV56 100.0000 100.000000 1.000000
Legionella pneumophila subsp. pneumophila ATCC 43290 100.0000 100.000000 1.000000
Zymomonas mobilis subsp. mobilis ATCC 29191 100.0000 100.000000 1.000000
Legionella pneumophila subsp. pneumophila 100.0000 100.000000 1.000000
Chlamydia trachomatis L3/404/LN 100.0000 100.000000 1.000000
Chlamydia trachomatis RC-J/953 100.0000 100.000000 1.000000
Psychromonas sp. CNPT3 100.0000 100.000000 1.000000
Streptomyces albus J1074 100.0000 100.000000 1.000000
Leptospira interrogans serovar Lai str. IPAV 100.0000 100.000000 1.000000
Crassostrea gigas 22 99.9900 99.990000 0.992240
Campylobacter sp. 03-427 100.0000 100.000000 1.000000
Listeria monocytogenes serotype 4b str. LL195 100.0000 100.000000 1.000000
Wolbachia endosymbiont of Drosophila simulans wNo 100.0000 100.000000 1.000000
Pyrenophora teres f. teres 22 100.0000 100.000000 1.000000
Chlamydia trachomatis RC-Fs852 100.0000 100.000000 1.000000
Leptospirillum ferrooxidans C2-3 100.0000 100.000000 1.000000
Leuconostoc sp. C2 100.0000 100.000000 1.000000
Escherichia coli BL21(DE3) 100.0000 100.000000 1.000000
Leuconostoc mesenteroides subsp. mesenteroides J18 100.0000 100.000000 1.000000
Lactobacillus brevis KB290 100.0000 100.000000 1.000000
Listeria ivanovii subsp. ivanovii PAM 55 100.0000 100.000000 1.000000
Listeria monocytogenes 07PF0776 100.0000 100.000000 1.000000
Nocardiopsis alba ATCC BAA-2165 100.0000 100.000000 1.000000
Chlamydia trachomatis L2b/Ams1 100.0000 100.000000 1.000000
Bacillus thuringiensis YBT-1518 100.0000 100.000000 1.000000
Nocardia brasiliensis ATCC 700358 100.0000 100.000000 1.000000
Serratia plymuthica AS9 100.0000 100.000000 1.000000
Listeria monocytogenes 10403S 100.0000 100.000000 1.000000
Listeria monocytogenes Finland 1998 100.0000 100.000000 1.000000
Hyaloperonospora arabidopsidis 22 99.9500 99.950000 0.971280
Listeria monocytogenes FSL R2-561 100.0000 100.000000 1.000000
Mycoplasma hyopneumoniae 168-L 100.0000 100.000000 1.000000
Listeria monocytogenes J0161 100.0000 100.000000 1.000000
Listeria monocytogenes M7 100.0000 100.000000 1.000000
Hebeloma cylindrosporum h7 v2.0 0.5100 0.510000 0.009919
Listeria monocytogenes L99 100.0000 100.000000 1.000000
Marinitoga piezophila KA3 100.0000 100.000000 1.000000
Haemophilus parasuis ZJ0906 100.0000 100.000000 1.000000
Bacillus subtilis subsp. natto BEST195 100.0000 100.000000 1.000000
Vibrio campbellii ATCC BAA-1116 85.1100 85.110000 0.807559
Marinobacter adhaerens HP15 99.9800 99.980000 0.985397
Marinobacter hydrocarbonoclasticus ATCC 49840 100.0000 100.000000 1.000000
Megasphaera elsdenii DSM 20460 100.0000 100.000000 1.000000
Melioribacter roseus P3M 100.0000 100.000000 1.000000
Thiomonas arsenitoxydans 100.0000 100.000000 1.000000
butyrate-producing bacterium SS3/4 100.0000 100.000000 1.000000
Melissococcus plutonius DAT561 100.0000 100.000000 1.000000
Mesorhizobium opportunistum WSM2075 100.0000 100.000000 1.000000
Enterococcus faecalis str. Symbioflor 1 100.0000 100.000000 1.000000
Mesotoga prima MesG1.Ag.4.2 100.0000 100.000000 1.000000
Methanocella conradii HZ254 100.0000 100.000000 1.000000
Eubacterium siraeum V10Sc8a 100.0000 100.000000 1.000000
Methanococcus maripaludis X1 99.9600 99.960000 0.975192
Streptococcus mutans LJ23 100.0000 100.000000 1.000000
Methanoculleus bourgensis MS2 91.7500 91.750000 0.854960
Methanosaeta harundinacea 6Ac 99.9600 99.960000 0.975192
Methanosalsum zhilinae DSM 4017 100.0000 100.000000 1.000000
Methanothermococcus okinawensis IH1 100.0000 100.000000 1.000000
Sinorhizobium meliloti 2011 100.0000 100.000000 1.000000
Hanseniaspora valbyensis NRRL Y-1626 v1.1 0.0000 0.000000 0.000000
Methylomicrobium alcaliphilum 100.0000 100.000000 1.000000
Ralstonia solanacearum 100.0000 100.000000 1.000000
Ruminococcus bromii 100.0000 100.000000 1.000000
Methylophaga sp. JAM1 100.0000 100.000000 1.000000
Saprospira grandis str. Lewin 100.0000 100.000000 1.000000
Chlamydia psittaci VS225 100.0000 100.000000 1.000000
Methylophaga sp. JAM7 100.0000 100.000000 1.000000
Chlamydia trachomatis L1/115 100.0000 100.000000 1.000000
Micavibrio aeruginosavorus ARL-13 100.0000 100.000000 1.000000
Chlamydia trachomatis L1/440/LN 100.0000 100.000000 1.000000
Pseudomonas sp. VLB120 100.0000 100.000000 1.000000
Microlunatus phosphovorus NM-1 100.0000 100.000000 1.000000
Modestobacter marinus 100.0000 100.000000 1.000000
Chlamydia trachomatis L2b/Ams2 100.0000 100.000000 1.000000
Chlamydia psittaci 84/55 100.0000 100.000000 1.000000
Muricauda ruestringensis DSM 13258 100.0000 100.000000 1.000000
Oryza nivara 22 26.0200 26.020000 0.306562
Mycobacterium africanum GM041182 100.0000 100.000000 1.000000
Microbotryum violaceum 22 100.0000 100.000000 1.000000
Mycobacterium bovis BCG str. Mexico 100.0000 100.000000 1.000000
Enterobacter cloacae subsp. cloacae ENHKU01 100.0000 100.000000 1.000000
[Ruminococcus] torques 100.0000 100.000000 1.000000
Mycobacterium canettii CIPT 140010059 100.0000 100.000000 1.000000
Corynebacterium glutamicum ATCC 13032 99.8000 99.800000 0.947980
Mycobacterium chubuense NBB4 100.0000 100.000000 1.000000
Mycobacterium intracellulare ATCC 13950 100.0000 100.000000 1.000000
Chlamydia pecorum P787 100.0000 100.000000 1.000000
Brucella ceti TE28753-12 100.0000 100.000000 1.000000
Mycobacterium intracellulare MOTT-02 100.0000 100.000000 1.000000
Mycobacterium intracellulare MOTT-64 100.0000 100.000000 1.000000
Candidatus Cardinium hertigii 99.8900 99.890000 0.959266
Helicobacter pylori BM012A 100.0000 100.000000 1.000000
Xiphophorus maculatus 76_4.4.2 100.0000 100.000000 1.000000
Mycobacterium massiliense str. GO 06 99.9800 99.980000 0.985397
Helicobacter pylori UM066 100.0000 100.000000 1.000000
Xenopus (Silurana) tropicalis v7.1 (annotation v7.2) 72.6800 72.680000 0.716737
Riemerella anatipestifer RA-GD 100.0000 100.000000 1.000000
Mycobacterium sp. MOTT36Y 100.0000 100.000000 1.000000
Streptococcus pyogenes M1 476 100.0000 100.000000 1.000000
Mycobacterium rhodesiae NBB3 100.0000 100.000000 1.000000
Mycobacterium tuberculosis CCDC5079 100.0000 100.000000 1.000000
Mycobacterium tuberculosis CCDC5180 100.0000 100.000000 1.000000
Mycobacterium tuberculosis CTRI-2 100.0000 100.000000 1.000000
Listeria monocytogenes EGD sequence 100.0000 100.000000 1.000000
Streptococcus pseudopneumoniae IS7493 100.0000 100.000000 1.000000
Mycobacterium tuberculosis KZN 4207 100.0000 100.000000 1.000000
Listeria monocytogenes serotype 1/2b str. SLCC2755 100.0000 100.000000 1.000000
Mycoplasma hyorhinis SK76 100.0000 100.000000 1.000000
Mycobacterium tuberculosis str. Beijing/NITR203 100.0000 100.000000 1.000000
Mycoplasma gallisepticum NY01_2001.047-5-1P 100.0000 100.000000 1.000000
Mycobacterium tuberculosis KZN 605 100.0000 100.000000 1.000000
Enterobacter aerogenes EA1509E 100.0000 100.000000 1.000000
Cycloclasticus sp. P1 100.0000 100.000000 1.000000
Mycobacterium tuberculosis RGTB327 100.0000 100.000000 1.000000
Xanthomonas axonopodis pv. citrumelo F1 100.0000 100.000000 1.000000
Chlamydia psittaci NJ1 100.0000 100.000000 1.000000
Desulfitobacterium dichloroeliminans LMG P-21439 100.0000 100.000000 1.000000
Mycobacterium tuberculosis RGTB423 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Heidelberg str. 41578 100.0000 100.000000 1.000000
Streptococcus suis JS14 100.0000 100.000000 1.000000
Methanobrevibacter sp. AbM4 100.0000 100.000000 1.000000
Vibrio alginolyticus NBRC 15630 = ATCC 17749 100.0000 100.000000 1.000000
Synechocystis sp. PCC 6803 substr. GT-I 100.0000 100.000000 1.000000
Xanthomonas oryzae pv. oryzicola BLS256 100.0000 100.000000 1.000000
Mycobacterium yongonense 05-1390 100.0000 100.000000 1.000000
Clostridium saccharolyticum Clostridium cf. saccharolyticum K10 100.0000 100.000000 1.000000
Sulfobacillus acidophilus DSM 10332 100.0000 100.000000 1.000000
Borrelia afzelii PKo 99.8700 99.870000 0.956117
Mycobacterium bovis BCG str. Korea 1168P 100.0000 100.000000 1.000000
Mycobacterium tuberculosis UT205 100.0000 100.000000 1.000000
Alteromonas macleodii str. 'Black Sea 11' 100.0000 100.000000 1.000000
Aeromonas hydrophila ML09-119 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus str. JKD6008 100.0000 100.000000 1.000000
Amycolatopsis mediterranei S699 100.0000 100.000000 1.000000
Mycoplasma genitalium M2321 100.0000 100.000000 1.000000
Klebsiella pneumoniae JM45 100.0000 100.000000 1.000000
Gluconacetobacter diazotrophicus PAl 5 99.4600 99.460000 0.927513
Streptococcus pneumoniae INV200 100.0000 100.000000 1.000000
Chlamydia trachomatis RC-L2s46 100.0000 100.000000 1.000000
Mycoplasma bovis HB0801 94.8000 94.800000 0.876783
Rubrivivax gelatinosus IL144 100.0000 100.000000 1.000000
Streptococcus pneumoniae ST556 100.0000 100.000000 1.000000
Helicobacter pylori OK310 100.0000 100.000000 1.000000
Corynebacterium argentoratense DSM 44202 100.0000 100.000000 1.000000
Linum usitatissimum v200 2.6800 2.680000 0.040018
Aggregatibacter actinomycetemcomitans D11S-1 100.0000 100.000000 1.000000
Chthonomonas calidirosea T49 100.0000 100.000000 1.000000
Bacillus amyloliquefaciens subsp. plantarum sequencing 100.0000 100.000000 1.000000
Hyphomicrobium denitrificans 1NES1 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus MRSA252 100.0000 100.000000 1.000000
Ammonifex degensii KC4 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus USA300_FPR3757 100.0000 100.000000 1.000000
Candidatus Koribacter versatilis Ellin345 99.7300 99.730000 0.942041
Helicobacter cinaedi ATCC BAA-847 100.0000 100.000000 1.000000
Treponema brennaborense DSM 12168 100.0000 100.000000 1.000000
Vibrio anguillarum 775 99.9700 99.970000 0.979928
Aspergillus niger ATCC 1015 89.5100 89.510000 0.839296
Aureococcus anophagefferens 97.0600 97.060000 0.894789
Riemerella anatipestifer RA-CH-2 100.0000 100.000000 1.000000
Aspergillus clavatus NRRL 1 99.6000 99.600000 0.933893
Aspergillus oryzae RIB40 99.6200 99.620000 0.935302
Streptococcus agalactiae A909 100.0000 100.000000 1.000000
Pirellula staleyi DSM 6068 100.0000 100.000000 1.000000
Sulfurospirillum deleyianum DSM 6946 100.0000 100.000000 1.000000
Pandoraea pnomenusa 3kgm 100.0000 100.000000 1.000000
Methanocaldococcus vulcanius M7 100.0000 100.000000 1.000000
Rhodothermus marinus DSM 4252 100.0000 100.000000 1.000000
Haliangium ochraceum DSM 14365 100.0000 100.000000 1.000000
Candidatus Sulcia muelleri DMIN 100.0000 100.000000 1.000000
Haloferax volcanii DS2 99.9900 99.990000 0.992240
Methanohalophilus mahii DSM 5219 100.0000 100.000000 1.000000
Burkholderia sp. CCGE1002 100.0000 100.000000 1.000000
Amanita thiersii Skay4041 v1.0 0.6400 0.640000 0.011898
Nitrosococcus halophilus Nc4 100.0000 100.000000 1.000000
Mycoplasma bovis Hubei-1 100.0000 100.000000 1.000000
cyanobacterium UCYN-A 100.0000 100.000000 1.000000
Mycoplasma gallisepticum str. F 100.0000 100.000000 1.000000
Bdellovibrio exovorus JSS 99.9600 99.960000 0.975192
Listeria monocytogenes serotype 1/2c str. SLCC2372 100.0000 100.000000 1.000000
Meiothermus ruber DSM 1279 100.0000 100.000000 1.000000
Natrialba magadii ATCC 43099 99.9800 99.980000 0.985397
Bacillus pseudofirmus OF4 99.9200 99.920000 0.963395
Mycoplasma gallisepticum str. R(high) 100.0000 100.000000 1.000000
Bacillus megaterium QM B1551 99.9900 99.990000 0.992240
Mycoplasma haemocanis str. Illinois 87.9200 87.920000 0.827820
Mycobacterium canettii CIPT 140060008 100.0000 100.000000 1.000000
Streptococcus mitis B6 100.0000 100.000000 1.000000
Ferroglobus placidus DSM 10642 100.0000 100.000000 1.000000
Sanguibacter keddieii DSM 10542 100.0000 100.000000 1.000000
Streptomyces flavogriseus ATCC 33331 100.0000 100.000000 1.000000
Escherichia coli O103:H2 str. 12009 100.0000 100.000000 1.000000
Chlamydia trachomatis B/TZ1A828/OT 100.0000 100.000000 1.000000
Streptococcus suis SS12 100.0000 100.000000 1.000000
Acinetobacter oleivorans DR1 100.0000 100.000000 1.000000
Clostridium cellulovorans 743B 100.0000 100.000000 1.000000
Streptococcus pneumoniae TCH8431/19A 100.0000 100.000000 1.000000
Thermoanaerobacter mathranii subsp. mathranii str. A3 100.0000 100.000000 1.000000
Micromonospora aurantiaca ATCC 27029 100.0000 100.000000 1.000000
Mycoplasma haemofelis Ohio2 100.0000 100.000000 1.000000
Acidilobus saccharovorans 345-15 100.0000 100.000000 1.000000
Candidatus Nasuia deltocephalinicola str. NAS-ALF 100.0000 100.000000 1.000000
Aquifex aeolicus VF5 97.4500 97.450000 0.897918
syncytium symbiont of Diaphorina citri 100.0000 100.000000 1.000000
Acinetobacter sp. ADP1 99.5800 99.580000 0.933034
Propionibacterium acnes KPA171202 99.9800 99.980000 0.985397
Streptococcus oralis Uo5 100.0000 100.000000 1.000000
Anaeromyxobacter dehalogenans 2CP-C 99.6900 99.690000 0.938858
Archaeoglobus fulgidus DSM 4304 96.7800 96.780000 0.892450
Anopheles gambiae 49_3j 77.3800 77.380000 0.751854
Mahella australiensis 50-1 BON 100.0000 100.000000 1.000000
Apis mellifera 38.2d 4.0800 4.080000 0.058288
Candidatus Sulcia muelleri CARI 100.0000 100.000000 1.000000
Sphingopyxis alaskensis RB2256 99.7500 99.750000 0.943175
Candida albicans SC5314 85.4700 85.470000 0.810203
Anaplasma marginale str. St. Maries 98.5600 98.560000 0.910191
Mycoplasma hyopneumoniae 168 100.0000 100.000000 1.000000
Aspergillus nidulans FGSC A4 61.9800 61.980000 0.633680
Alteromonas macleodii str. 'English Channel 615' 99.9900 99.990000 0.992240
Mycoplasma gallisepticum NC95_13295-2-2P 100.0000 100.000000 1.000000
Aspergillus fumigatus Af293 90.2100 90.210000 0.844320
Aeropyrum pernix K1 99.3800 99.380000 0.924902
Staphylococcus aureus subsp. aureus NCTC 8325 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus MSSA476 100.0000 100.000000 1.000000
Anaplasma phagocytophilum HZ 99.8200 99.820000 0.951221
Arabidopsis thaliana 10 95.7900 95.790000 0.884634
Agrobacterium tumefaciens str. C58 99.0100 99.010000 0.915878
Mycobacterium avium subsp. paratuberculosis K-10 99.9700 99.970000 0.979928
Listeria monocytogenes J1-220 100.0000 100.000000 1.000000
Escherichia coli KO11FL 100.0000 100.000000 1.000000
Mycoplasma crocodyli MP145 99.7100 99.710000 0.940633
Aedes aegypti 55 97.5900 97.590000 0.899451
Aster yellows witches'-broom phytoplasma AYWB 99.0300 99.030000 0.916371
Aromatoleum aromaticum EbN1 99.4300 99.430000 0.926866
Bacillus anthracis str. Sterne 99.9900 99.990000 0.992240
Baumannia cicadellinicola str. Hc (Homalodisca coagulata) 98.3200 98.320000 0.907113
Brucella abortus bv. 1 str. 9-941 100.0000 100.000000 1.000000
Mycoplasma hyorhinis GDL-1 100.0000 100.000000 1.000000
Burkholderia xenovorans LB400 99.7200 99.720000 0.941520
Mycoplasma hyorhinis MCLD 100.0000 100.000000 1.000000
Sulfolobus islandicus HVE10/4 100.0000 100.000000 1.000000
Burkholderia thailandensis E264 99.7100 99.710000 0.940633
Mycoplasma leachii 99/014/6 100.0000 100.000000 1.000000
Burkholderia cenocepacia AU 1054 99.8600 99.860000 0.954679
Fretibacterium fastidiosum 100.0000 100.000000 1.000000
Botrytis cinerea B05.10 31.1400 31.140000 0.358382
Batrachochytrium dendrobatidis JEL423 18.0700 18.070000 0.221634
Batrachochytrium dendrobatidis JAM81 99.6300 99.630000 0.935914
Parvularcula bermudensis HTCC2503 100.0000 100.000000 1.000000
Methylotenera versatilis 301 100.0000 100.000000 1.000000
Brachyspira murdochii DSM 12563 100.0000 100.000000 1.000000
Gallionella capsiferriformans ES-2 100.0000 100.000000 1.000000
Methanohalobium evestigatum Z-7303 100.0000 100.000000 1.000000
Thermincola potens JR 100.0000 100.000000 1.000000
Dehalogenimonas lykanthroporepellens BL-DC-9 100.0000 100.000000 1.000000
Brachyspira pilosicoli 95/1000 100.0000 100.000000 1.000000
Mycoplasma genitalium M2288 100.0000 100.000000 1.000000
Herbaspirillum seropedicae SmR1 100.0000 100.000000 1.000000
Prevotella melaninogenica ATCC 25845 100.0000 100.000000 1.000000
Haloarcula hispanica N601 99.4000 99.400000 0.925577
Thermosphaera aggregans DSM 11486 100.0000 100.000000 1.000000
Bifidobacterium longum subsp. longum JDM301 100.0000 100.000000 1.000000
Tsukamurella paurometabola DSM 20162 100.0000 100.000000 1.000000
Mobiluncus curtisii ATCC 43063 99.9400 99.940000 0.967919
gamma proteobacterium HdN1 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus M013 100.0000 100.000000 1.000000
Lactobacillus casei str. Zhang 100.0000 100.000000 1.000000
Stenotrophomonas maltophilia JV3 100.0000 100.000000 1.000000
Xenorhabdus nematophila ATCC 19061 99.9800 99.980000 0.985397
Corynebacterium pseudotuberculosis FRC41 100.0000 100.000000 1.000000
Thiomonas intermedia K12 100.0000 100.000000 1.000000
Arcanobacterium haemolyticum DSM 20595 99.9400 99.940000 0.967919
Syntrophothermus lipocalidus DSM 12680 100.0000 100.000000 1.000000
Amanita muscaria Koide v1.0 0.2600 0.260000 0.006078
Caldicellulosiruptor obsidiansis OB47 100.0000 100.000000 1.000000
Halalkalicoccus jeotgali B3 100.0000 100.000000 1.000000
Enterobacter cloacae subsp. cloacae ATCC 13047 100.0000 100.000000 1.000000
Ralstonia solanacearum CFBP2957 99.9500 99.950000 0.971280
Hyphomicrobium denitrificans ATCC 51888 100.0000 100.000000 1.000000
Bacillus anthracis str. Ames 100.0000 100.000000 1.000000
Borrelia burgdorferi B31 99.6400 99.640000 0.936435
Bacillus cereus ATCC 14579 99.9500 99.950000 0.971280
Fibrobacter succinogenes subsp. succinogenes S85 99.9700 99.970000 0.979928
Bdellovibrio bacteriovorus HD100 99.4600 99.460000 0.927513
Bordetella pertussis Tohama I 99.9900 99.990000 0.992240
Octopus bimaculoides 280 61.3300 61.330000 0.628252
Buchnera aphidicola str. Sg (Schizaphis graminum) 95.6800 95.680000 0.883560
Bacillus halodurans C-125 99.5200 99.520000 0.930090
Burkholderia mallei ATCC 23344 99.9700 99.970000 0.979928
Mycoplasma pneumoniae 309 100.0000 100.000000 1.000000
Bradyrhizobium japonicum USDA 110 99.1200 99.120000 0.918313
Burkholderia lata 99.6300 99.630000 0.935914
Mycoplasma pneumoniae FH 100.0000 100.000000 1.000000
Mycoplasma putrefaciens KS1 100.0000 100.000000 1.000000
Bifidobacterium longum NCC2705 99.7800 99.780000 0.946204
Lactobacillus helveticus R0052 100.0000 100.000000 1.000000
Brucella melitensis bv. 1 str. 16M 99.9500 99.950000 0.971280
Buchnera aphidicola str. APS (Acyrthosiphon pisum) 99.3000 99.300000 0.922748
Natronomonas moolapensis 8.8.11 99.7800 99.780000 0.946204
Bordetella bronchiseptica RB50 99.9800 99.980000 0.985397
Bordetella parapertussis 12822 99.8800 99.880000 0.957646
Bartonella quintana str. Toulouse 99.9400 99.940000 0.967919
Staphylococcus aureus 100.0000 100.000000 1.000000
Bacillus subtilis subsp. subtilis str. 168 99.9900 99.990000 0.992240
Bacteroides thetaiotaomicron VPI-5482 99.9100 99.910000 0.961774
Buchnera aphidicola str. Bp (Baizongia pistaciae) 97.4400 97.440000 0.897763
Bos taurus 76_3.1 99.4400 99.440000 0.927112
Mycoplasma wenyonii str. Massachusetts 100.0000 100.000000 1.000000
Bacillus cereus ATCC 10987 99.9600 99.960000 0.975192
Brucella melitensis biovar Abortus 2308 100.0000 100.000000 1.000000
Burkholderia pseudomallei 1710b 99.9400 99.940000 0.967919
Ciona savignyi 76_2.0 100.0000 100.000000 1.000000
Helicobacter pylori OK113 100.0000 100.000000 1.000000
Lactobacillus acidophilus La-14 100.0000 100.000000 1.000000
Chlamydophila caviae GPIC 99.6900 99.690000 0.938858
Chlamydophila pneumoniae TW-183 94.3700 94.370000 0.873632
Chlamydophila abortus S26/3 99.4500 99.450000 0.927359
Chlamydia trachomatis J/6276tet1 100.0000 100.000000 1.000000
Chlorobium chlorochromatii CaD3 99.4000 99.400000 0.925577
Chlamydophila felis Fe/C-56 99.9200 99.920000 0.963395
Phaeobacter gallaeciensis DSM 26640 100.0000 100.000000 1.000000
Chromohalobacter salexigens DSM 3043 99.4600 99.460000 0.927513
Myxococcus fulvus HW-1 100.0000 100.000000 1.000000
Carboxydothermus hydrogenoformans Z-2901 99.8100 99.810000 0.949783
Salmonella enterica subsp. enterica serovar Pullorum str. S06004 100.0000 100.000000 1.000000
Methanothermobacter marburgensis str. Marburg 99.5200 99.520000 0.930090
Planctomyces limnophilus DSM 3776 100.0000 100.000000 1.000000
Geobacillus sp. C56-T3 100.0000 100.000000 1.000000
Acetohalobium arabaticum DSM 5501 100.0000 100.000000 1.000000
Staphylothermus hellenicus DSM 12710 100.0000 100.000000 1.000000
Clostridium ljungdahlii DSM 13528 100.0000 100.000000 1.000000
Bacillus selenitireducens MLS10 100.0000 100.000000 1.000000
Chlamydia trachomatis F/SotonF3 100.0000 100.000000 1.000000
Legionella pneumophila 2300/99 Alcoy 100.0000 100.000000 1.000000
Cyanobium gracile PCC 6307 100.0000 100.000000 1.000000
Bacillus thuringiensis BMB171 100.0000 100.000000 1.000000
Shigella dysenteriae 1617 99.3800 99.380000 0.924902
Spirochaeta smaragdinae DSM 11293 100.0000 100.000000 1.000000
Leuconostoc kimchii IMSNU 11154 100.0000 100.000000 1.000000
Thermoanaerobacterium thermosaccharolyticum DSM 571 100.0000 100.000000 1.000000
Desulfurivibrio alkaliphilus AHT2 100.0000 100.000000 1.000000
Pythium irregulare DAOM BR486 22 0.8500 0.850000 0.015142
Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1 99.9600 99.960000 0.975192
Mycoplasma hyorhinis HUB-1 100.0000 100.000000 1.000000
Bacillus cereus biovar anthracis str. CI 100.0000 100.000000 1.000000
Burkholderia pseudomallei BPC006 100.0000 100.000000 1.000000
Croceibacter atlanticus HTCC2559 100.0000 100.000000 1.000000
Natrinema sp. J7-2 99.3400 99.340000 0.924100
Cellulomonas flavigena DSM 20109 100.0000 100.000000 1.000000
Candidatus Nitrospira defluvii 100.0000 100.000000 1.000000
Streptococcus suis S735 100.0000 100.000000 1.000000
Methanococcus voltae A3 100.0000 100.000000 1.000000
Spirochaeta thermophila DSM 6578 100.0000 100.000000 1.000000
Leuconostoc gasicomitatum LMG 18811 99.5400 99.540000 0.931316
Starkeya novella DSM 506 99.9800 99.980000 0.985397
Neisseria gonorrhoeae TCDC-NG08107 100.0000 100.000000 1.000000
Amycolatopsis mediterranei U32 100.0000 100.000000 1.000000
Neisseria meningitidis 8013 100.0000 100.000000 1.000000
methanocaldococcus infernus ME 100.0000 100.000000 1.000000
Olsenella uli DSM 7084 100.0000 100.000000 1.000000
Thermosediminibacter oceani DSM 16646 100.0000 100.000000 1.000000
Neisseria meningitidis alpha710 100.0000 100.000000 1.000000
Clostridium acetobutylicum ATCC 824 99.9600 99.960000 0.975192
Glaciecola psychrophila 170 100.0000 100.000000 1.000000
Proteus mirabilis BB2000 100.0000 100.000000 1.000000
Caulobacter crescentus CB15 99.4000 99.400000 0.925577
Corynebacterium diphtheriae NCTC 13129 99.8000 99.800000 0.947980
Caenorhabditis elegans WormBase WS218 88.2300 88.230000 0.829996
Cryptococcus neoformans JEC21 99.5600 99.560000 0.932358
Chlorobium tepidum TLS 98.1900 98.190000 0.905830
Helicobacter pylori B8 99.9900 99.990000 0.992240
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 100.0000 100.000000 1.000000
Paracoccus aminophilus JCM 7686 100.0000 100.000000 1.000000
Candidatus Blochmannia floridanus 100.0000 100.000000 1.000000
Caenorhabditis elegans 76_235 94.8200 94.820000 0.877004
Neisseria meningitidis G2136 100.0000 100.000000 1.000000
Chlamydia muridarum Nigg 98.7700 98.770000 0.912712
Neisseria meningitidis H44/76 100.0000 100.000000 1.000000
Corynebacterium efficiens YS-314 97.5200 97.520000 0.898730
Chlamydophila pneumoniae J138 96.3400 96.340000 0.889174
Neisseria meningitidis M01-240149 100.0000 100.000000 1.000000
Chlamydophila pneumoniae AR39 96.6700 96.670000 0.891563
Chlamydophila pneumoniae CWL029 96.1600 96.160000 0.887561
Synechocystis sp. PCC 6803 99.9500 99.950000 0.971280
Chlamydia trachomatis D/UW-3/CX 99.9900 99.990000 0.992240
Clostridium perfringens str. 13 99.8100 99.810000 0.949783
Cryptosporidium parvum Iowa II 99.8400 99.840000 0.952813
Caenorhabditis briggsae 2 98.3300 98.330000 0.907451
Malus domestica v196 1.2100 1.210000 0.020234
Coxiella burnetii RSA 493 99.0700 99.070000 0.917081
Chlamydomonas reinhardtii 4.0 52.0000 52.000000 0.550122
Treponema primitia ZAS-2 99.9700 99.970000 0.979928
Saccharophagus degradans 2-40 99.8000 99.800000 0.947980
Shigella dysenteriae Sd197 99.9900 99.990000 0.992240
Desulfitobacterium hafniense Y51 99.8100 99.810000 0.949783
Staphylococcus aureus subsp. aureus T0131 100.0000 100.000000 1.000000
Clostridium saccharolyticum WM1 100.0000 100.000000 1.000000
Deinococcus geothermalis DSM 11300 99.5400 99.540000 0.931316
Neisseria meningitidis M01-240355 100.0000 100.000000 1.000000
Dasypus novemcinctus 76_2 18.9500 18.950000 0.231397
Neisseria meningitidis M04-240196 100.0000 100.000000 1.000000
Neisseria meningitidis NZ-05/33 100.0000 100.000000 1.000000
Daphnia pulex 97.9700 97.970000 0.903426
Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 100.0000 100.000000 1.000000
Neisseria meningitidis WUE 2594 100.0000 100.000000 1.000000
Actinobacillus pleuropneumoniae serovar 7 str. AP76 99.9700 99.970000 0.979928
Meiothermus silvanus DSM 9946 100.0000 100.000000 1.000000
Butyrivibrio proteoclasticus B316 100.0000 100.000000 1.000000
Niastella koreensis GR20-10 100.0000 100.000000 1.000000
Brevundimonas subvibrioides ATCC 15264 100.0000 100.000000 1.000000
Thermobispora bispora DSM 43833 99.8000 99.800000 0.947980
Nitrosococcus watsonii C-113 100.0000 100.000000 1.000000
Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 100.0000 100.000000 1.000000
Segniliparus rotundus DSM 44985 100.0000 100.000000 1.000000
Arcobacter nitrofigilis DSM 7299 100.0000 100.000000 1.000000
Desulfarculus baarsii DSM 2075 100.0000 100.000000 1.000000
Erwinia billingiae Eb661 100.0000 100.000000 1.000000
Nitrosomonas sp. Is79A3 100.0000 100.000000 1.000000
Ralstonia solanacearum PSI07 100.0000 100.000000 1.000000
Moraxella catarrhalis RH4 100.0000 100.000000 1.000000
'Nostoc azollae' 0708 100.0000 100.000000 1.000000
Waddlia chondrophila WSU 86-1044 100.0000 100.000000 1.000000
Idiomarina loihiensis GSL 199 100.0000 100.000000 1.000000
Synechococcus sp. JA-3-3Ab 99.7900 99.790000 0.946909
Gallibacterium anatis UMN179 100.0000 100.000000 1.000000
Bifidobacterium bifidum S17 100.0000 100.000000 1.000000
Candidatus Cloacamonas acidaminovorans 100.0000 100.000000 1.000000
Selenomonas sputigena ATCC 35185 100.0000 100.000000 1.000000
Methanocella arvoryzae MRE50 99.8400 99.840000 0.952813
Amycolicicoccus subflavus DQS3-9A1 100.0000 100.000000 1.000000
Mycoplasma suis KI3806 100.0000 100.000000 1.000000
Acinetobacter baumannii BJAB0715 100.0000 100.000000 1.000000
Hydnomerulius pinastri v2.0 0.4700 0.470000 0.009330
Thermococcus sp. 4557 100.0000 100.000000 1.000000
Methanosphaerula palustris E1-9c 100.0000 100.000000 1.000000
Nocardia cyriacigeorgica GUH-2 100.0000 100.000000 1.000000
Candidatus Zinderia insecticola CARI 100.0000 100.000000 1.000000
Desulfococcus oleovorans Hxd3 99.8800 99.880000 0.957646
Achromobacter xylosoxidans A8 100.0000 100.000000 1.000000
Oceanimonas sp. GK1 100.0000 100.000000 1.000000
Geobacter sp. M18 100.0000 100.000000 1.000000
Oligotropha carboxidovorans OM4 100.0000 100.000000 1.000000
Danio rerio 76_9 98.4000 98.400000 0.908170
Truepera radiovictrix DSM 17093 100.0000 100.000000 1.000000
Drosophila melanogaster 76_5 92.6400 92.640000 0.861352
Streptococcus agalactiae SA20-06 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus S0385 100.0000 100.000000 1.000000
Spiroplasma chrysopicola DF-1 100.0000 100.000000 1.000000
Clostridium pasteurianum BC1 100.0000 100.000000 1.000000
Canis familiaris 76_3.1 99.7900 99.790000 0.946909
Debaromyces hansenii 34.5900 34.590000 0.391978
Dechloromonas aromatica RCB 99.6600 99.660000 0.937203
Drosophila ananassae 1.3 99.9400 99.940000 0.967919
Dehalococcoides sp. CBDB1 100.0000 100.000000 1.000000
Drosophila melanogaster FlyBase 5.12 93.6700 93.670000 0.868810
Marivirga tractuosa DSM 4126 100.0000 100.000000 1.000000
Drosophila pseudoobscura 2.13 95.1900 95.190000 0.879944
Tuber melanosporum Mel28 22 99.9900 99.990000 0.992240
Desulfotalea psychrophila LSv54 98.8900 98.890000 0.914112
Drosophila persimilis 1.3 99.9300 99.930000 0.965199
Deinococcus radiodurans R1 94.8300 94.830000 0.877160
Ornithobacterium rhinotracheale DSM 15997 100.0000 100.000000 1.000000
Desulfovibrio alaskensis G20 99.8200 99.820000 0.951221
Chlamydia psittaci M56 100.0000 100.000000 1.000000
Dictyostelium discoideum 96.1700 96.170000 0.887717
Drosophila virilis 1.2 99.9400 99.940000 0.967919
Desulfovibrio vulgaris str. Hildenborough 99.4200 99.420000 0.926620
Dactylococcopsis salina PCC 8305 100.0000 100.000000 1.000000
Drosophila simulans 1.3 99.9300 99.930000 0.965199
Oscillibacter valericigenes Sjm18-20 100.0000 100.000000 1.000000
Streptococcus suis T15 100.0000 100.000000 1.000000
Drosophila mojavensis 1.3 99.9600 99.960000 0.975192
Sulfolobus solfataricus 98/2 99.9800 99.980000 0.985397
Drosophila yakuba 1.3 99.9400 99.940000 0.967919
Drosophila sechellia 1.3 99.9600 99.960000 0.975192
Owenweeksia hongkongensis DSM 17368 100.0000 100.000000 1.000000
Escherichia coli CFT073 100.0000 100.000000 1.000000
Zea mays v181 62.8500 62.850000 0.640817
Escherichia coli O157:H7 str. EDL933 99.9800 99.980000 0.985397
Escherichia coli UTI89 100.0000 100.000000 1.000000
Bifidobacterium longum DJO10A 100.0000 100.000000 1.000000
Geobacillus sp. JF8 99.9200 99.920000 0.963395
Rhodopseudomonas palustris TIE-1 100.0000 100.000000 1.000000
Chlamydia trachomatis D/SotonD6 100.0000 100.000000 1.000000
Hydrogenobaculum sp. Y04AAS1 100.0000 100.000000 1.000000
Paenibacillus mucilaginosus 3016 100.0000 100.000000 1.000000
Stenotrophomonas maltophilia R551-3 100.0000 100.000000 1.000000
Tepidanaerobacter acetatoxydans Re1 100.0000 100.000000 1.000000
Desulfotomaculum ruminis DSM 2154 100.0000 100.000000 1.000000
Yersinia pestis biovar Medievalis str. Harbin 35 100.0000 100.000000 1.000000
Methanothermus fervidus DSM 2088 100.0000 100.000000 1.000000
Granulicella tundricola MP5ACTX9 100.0000 100.000000 1.000000
Sulfuricurvum kujiense DSM 16994 100.0000 100.000000 1.000000
Rhodopirellula baltica SH 1 99.2300 99.230000 0.920749
Paenibacillus mucilaginosus K02 100.0000 100.000000 1.000000
Pantoea sp. At-9b 100.0000 100.000000 1.000000
Paenibacillus mucilaginosus KNP414 99.9900 99.990000 0.992240
Pseudomonas monteilii SB3078 100.0000 100.000000 1.000000
Streptococcus pneumoniae 670-6B 100.0000 100.000000 1.000000
Delftia sp. Cs1-4 100.0000 100.000000 1.000000
Caldicellulosiruptor owensensis OL 100.0000 100.000000 1.000000
Burkholderia rhizoxinica HKI 454 100.0000 100.000000 1.000000
Rhodococcus equi 103S 100.0000 100.000000 1.000000
Burkholderia gladioli BSR3 99.9900 99.990000 0.992240
Serratia plymuthica 4Rx13 100.0000 100.000000 1.000000
Clostridium sticklandii DSM 519 99.9600 99.960000 0.975192
Streptococcus suis D9 100.0000 100.000000 1.000000
[Ruminococcus] obeum 100.0000 100.000000 1.000000
Treponema succinifaciens DSM 2489 100.0000 100.000000 1.000000
Paenibacillus polymyxa M1 100.0000 100.000000 1.000000
Mycobacterium gilvum Spyr1 100.0000 100.000000 1.000000
Rhodopseudomonas palustris DX-1 100.0000 100.000000 1.000000
Bacteroides salanitronis DSM 18170 100.0000 100.000000 1.000000
Pantoea vagans C9-1 100.0000 100.000000 1.000000
Haliscomenobacter hydrossis DSM 1100 100.0000 100.000000 1.000000
Enterobacteriaceae bacterium strain FGI 57 100.0000 100.000000 1.000000
Erysipelothrix rhusiopathiae str. Fujisawa 100.0000 100.000000 1.000000
Pseudomonas mendocina NK-01 100.0000 100.000000 1.000000
Pseudoalteromonas sp. SM9913 100.0000 100.000000 1.000000
Thermus oshimai JL-2 100.0000 100.000000 1.000000
Ferrimonas balearica DSM 9799 100.0000 100.000000 1.000000
Paenibacillus terrae HPL-003 100.0000 100.000000 1.000000
Pantoea ananatis AJ13355 99.9900 99.990000 0.992240
Thermococcus barophilus MP 100.0000 100.000000 1.000000
Pantoea ananatis PA13 100.0000 100.000000 1.000000
Ehrlichia ruminantium str. Gardel 98.0700 98.070000 0.904244
Pantoea ananatis LMG 5342 100.0000 100.000000 1.000000
Naegleria gruberi 95.6700 95.670000 0.883404
Parachlamydia acanthamoebae UV-7 99.6900 99.690000 0.938858
Escherichia coli str. K-12 substr. MG1655 100.0000 100.000000 1.000000
Prosthecochloris aestuarii DSM 271 99.9600 99.960000 0.975192
Echinops telfairi 76 13.5100 13.510000 0.170236
Enterococcus faecalis V583 100.0000 100.000000 1.000000
Ehrlichia chaffeensis str. Arkansas 99.8600 99.860000 0.954679
Ehrlichia ruminantium str. Welgevonden 97.8200 97.820000 0.901922
Erwinia tasmaniensis Et1/99 99.9800 99.980000 0.985397
Erinaceus europaeus 76 15.7900 15.790000 0.195835
Bacillus licheniformis DSM 13 = ATCC 14580 99.9500 99.950000 0.971280
Ehrlichia canis str. Jake 98.9700 98.970000 0.915259
Leishmania major strain Friedlin 97.9200 97.920000 0.903016
Entamoeba histolytica 1 99.4100 99.410000 0.926190
Escherichia coli O157:H7 str. Sakai 100.0000 100.000000 1.000000
Staphylococcus epidermidis RP62A 100.0000 100.000000 1.000000
Equus caballus 76_2 99.9200 99.920000 0.963395
Pectobacterium atrosepticum SCRI1043 99.6200 99.620000 0.935302
Hordeum vulgare 22 99.8600 99.860000 0.954679
Salmonella enterica subsp. enterica serovar Typhi str. Ty2 100.0000 100.000000 1.000000
Dehalococcoides ethenogenes 195 99.8900 99.890000 0.959266
Spirochaeta caldaria DSM 7334 100.0000 100.000000 1.000000
Chlorobaculum parvum NCIB 8327 99.8100 99.810000 0.949783
Escherichia coli str. K-12 substr. W3110 100.0000 100.000000 1.000000
Saccharothrix espanaensis DSM 44229 100.0000 100.000000 1.000000
Thermovibrio ammonificans HB-1 100.0000 100.000000 1.000000
Erythrobacter litoralis HTCC2594 99.6100 99.610000 0.934872
Shigella boydii CDC 3083-94 100.0000 100.000000 1.000000
Orientia tsutsugamushi str. Ikeda 99.7000 99.700000 0.939837
Singulisphaera acidiphila DSM 18658 100.0000 100.000000 1.000000
Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' 99.9700 99.970000 0.979928
Hippea maritima DSM 10411 100.0000 100.000000 1.000000
Halovivax ruber XH-70 100.0000 100.000000 1.000000
Vibrio fischeri MJ11 99.9500 99.950000 0.971280
Acidovorax avenae subsp. avenae ATCC 19860 100.0000 100.000000 1.000000
Candidatus Amoebophilus asiaticus 5a2 99.7000 99.700000 0.939837
Borrelia duttonii Ly 100.0000 100.000000 1.000000
Pseudomonas aeruginosa LESB58 100.0000 100.000000 1.000000
Pasteurella multocida subsp. multocida str. 3480 100.0000 100.000000 1.000000
Mycobacterium tuberculosis CCDC5079 100.0000 100.000000 1.000000
Streptococcus pyogenes NZ131 99.9800 99.980000 0.985397
Pasteurella multocida 36950 100.0000 100.000000 1.000000
Caldicellulosiruptor kronotskyensis 2002 100.0000 100.000000 1.000000
Exiguobacterium antarcticum B7 100.0000 100.000000 1.000000
Nitrosomonas sp. AL212 100.0000 100.000000 1.000000
Serratia plymuthica S13 100.0000 100.000000 1.000000
Rhodomicrobium vannielii ATCC 17100 100.0000 100.000000 1.000000
Pasteurella multocida subsp. multocida str. HN06 100.0000 100.000000 1.000000
Intrasporangium calvum DSM 43043 100.0000 100.000000 1.000000
Oceanithermus profundus DSM 14977 100.0000 100.000000 1.000000
Pediococcus claussenii ATCC BAA-344 100.0000 100.000000 1.000000
Ruminococcus albus 7 100.0000 100.000000 1.000000
Pelagibacterium halotolerans B2 100.0000 100.000000 1.000000
Bifidobacterium longum subsp. infantis 157F 100.0000 100.000000 1.000000
Phycisphaera mikurensis NBRC 102666 100.0000 100.000000 1.000000
Prevotella intermedia 17 100.0000 100.000000 1.000000
Sinorhizobium fredii USDA 257 100.0000 100.000000 1.000000
Desulfurococcus mucosus DSM 2162 100.0000 100.000000 1.000000
Prevotella denticola F0289 100.0000 100.000000 1.000000
Thermoanaerobacter brockii subsp. finnii Ako-1 100.0000 100.000000 1.000000
Lactobacillus delbrueckii subsp. bulgaricus ND02 100.0000 100.000000 1.000000
Marinomonas posidonica IVIA-Po-181 100.0000 100.000000 1.000000
Streptococcus pneumoniae AP200 100.0000 100.000000 1.000000
Geobacillus sp. Y4.1MC1 100.0000 100.000000 1.000000
Synechococcus sp. PCC 7502 100.0000 100.000000 1.000000
Thioalkalimicrobium cyclicum ALM1 100.0000 100.000000 1.000000
Propionibacterium acnes 266 100.0000 100.000000 1.000000
Propionibacterium acnes 6609 100.0000 100.000000 1.000000
Pseudomonas fulva 12-X 100.0000 100.000000 1.000000
Polymorphum gilvum SL003B-26A1 100.0000 100.000000 1.000000
Arthrospira platensis NIES-39 100.0000 100.000000 1.000000
Propionibacterium acnes ATCC 11828 100.0000 100.000000 1.000000
Comamonas testosteroni CNB-2 99.9700 99.970000 0.979928
Archaeoglobus veneficus SNP6 100.0000 100.000000 1.000000
Bacillus subtilis subsp. spizizenii str. W23 100.0000 100.000000 1.000000
Novosphingobium sp. PP1Y 100.0000 100.000000 1.000000
Faecalibacterium prausnitzii L2-6 100.0000 100.000000 1.000000
Glaciecola sp. 4H-3-7+YE-5 100.0000 100.000000 1.000000
Propionibacterium acnes TypeIA2 P.acn17 100.0000 100.000000 1.000000
Bacillus amyloliquefaciens DSM 7 100.0000 100.000000 1.000000
Lactobacillus kefiranofaciens ZW3 100.0000 100.000000 1.000000
Propionibacterium acnes TypeIA2 P.acn31 100.0000 100.000000 1.000000
Bacillus anthracis str. 'Ames Ancestor' 100.0000 100.000000 1.000000
Sphaerochaeta coccoides DSM 17374 100.0000 100.000000 1.000000
Bacteroides fragilis YCH46 99.9900 99.990000 0.992240
Plasmodium berghei ANKA 23.2000 23.200000 0.277253
Phanerochaete chrysosporium RP-78 2.1 0.9000 0.900000 0.015944
Desulfurococcus kamchatkensis 1221n 99.9300 99.930000 0.965199
Felis catus 76_6.2 99.8000 99.800000 0.947980
Bacillus cereus G9842 100.0000 100.000000 1.000000
Streptococcus dysgalactiae subsp. equisimilis AC-2713 100.0000 100.000000 1.000000
Fusarium graminearum 99.9300 99.930000 0.965199
Francisella tularensis subsp. holarctica FTNF002-00 99.9700 99.970000 0.979928
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 99.9700 99.970000 0.979928
Thermus thermophilus SG0.5JP17-16 100.0000 100.000000 1.000000
Methylobacterium populi BJ001 99.9600 99.960000 0.975192
Chlamydia trachomatis Ia/SotonIa1 100.0000 100.000000 1.000000
Frankia sp. CcI3 99.8500 99.850000 0.953608
Candidatus Sulcia muelleri str. Sulcia-ALF 100.0000 100.000000 1.000000
Bacteroides fragilis NCTC 9343 100.0000 100.000000 1.000000
Aspergillus fumigatus A1163 99.6800 99.680000 0.938062
Fusobacterium nucleatum subsp. nucleatum ATCC 25586 98.9200 98.920000 0.914576
Fusarium oxysporum f. sp. lycopersici 4286 99.6000 99.600000 0.933893
Chlorobium limicola DSM 245 99.9600 99.960000 0.975192
Desulfitobacterium hafniense DCB-2 100.0000 100.000000 1.000000
Propionibacterium acnes TypeIA2 P.acn33 100.0000 100.000000 1.000000
Desulfurobacterium thermolithotrophum DSM 11699 100.0000 100.000000 1.000000
Shigella flexneri 2a str. 2457T 100.0000 100.000000 1.000000
Francisella tularensis subsp. tularensis SCHU S4 100.0000 100.000000 1.000000
Methanosarcina barkeri str. Fusaro 99.7800 99.780000 0.946204
Paxillus rubicundulus Ve08.2h10 v1.0 0.2000 0.200000 0.004874
Fusarium verticillioides 7600 63.7500 63.750000 0.648059
Propionibacterium propionicum F0230a 100.0000 100.000000 1.000000
Plasmodium knowlesi strain H 98.3500 98.350000 0.907761
Serratia marcescens WW4 100.0000 100.000000 1.000000
Plasmodium chabaudi 17.0200 17.020000 0.209954
Providencia stuartii MRSN 2154 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Enteritidis str. P125109 100.0000 100.000000 1.000000
Coxiella burnetii CbuK_Q154 99.9700 99.970000 0.979928
Mycoplasma parvum str. Indiana 100.0000 100.000000 1.000000
Sphingobium chlorophenolicum L-1 100.0000 100.000000 1.000000
Bifidobacterium animalis subsp. lactis AD011 99.9900 99.990000 0.992240
Cyanothece sp. PCC 8801 100.0000 100.000000 1.000000
Streptococcus intermedius C270 100.0000 100.000000 1.000000
Borrelia recurrentis A1 100.0000 100.000000 1.000000
Listeria monocytogenes HCC23 100.0000 100.000000 1.000000
Deinococcus peraridilitoris DSM 19664 100.0000 100.000000 1.000000
Escherichia coli IAI39 100.0000 100.000000 1.000000
Campylobacter jejuni subsp. jejuni ICDCCJ07001 100.0000 100.000000 1.000000
Anaerolinea thermophila UNI-1 100.0000 100.000000 1.000000
Pseudoxanthomonas suwonensis 11-1 100.0000 100.000000 1.000000
Streptococcus pyogenes A20 100.0000 100.000000 1.000000
Bacillus atrophaeus 1942 100.0000 100.000000 1.000000
Pseudogulbenkiania sp. NH8B 100.0000 100.000000 1.000000
Synechococcus sp. JA-2-3B'a(2-13) 99.7200 99.720000 0.941520
Gardnerella vaginalis ATCC 14019 100.0000 100.000000 1.000000
Mycobacterium tuberculosis EAI5 100.0000 100.000000 1.000000
Cellulomonas fimi ATCC 484 100.0000 100.000000 1.000000
Nitratifractor salsuginis DSM 16511 100.0000 100.000000 1.000000
Pseudonocardia dioxanivorans CB1190 100.0000 100.000000 1.000000
Hydrogenobacter thermophilus TK-6 100.0000 100.000000 1.000000
Mycobacterium sp. JDM601 100.0000 100.000000 1.000000
Lactobacillus buchneri NRRL B-30929 100.0000 100.000000 1.000000
Bacillus amyloliquefaciens IT-45 100.0000 100.000000 1.000000
Alteromonas macleodii str. 'Balearic Sea AD45' 100.0000 100.000000 1.000000
Pseudomonas aeruginosa DK2 100.0000 100.000000 1.000000
Pseudomonas aeruginosa M18 100.0000 100.000000 1.000000
Mycoplasma fermentans M64 100.0000 100.000000 1.000000
Bartonella clarridgeiae 73 100.0000 100.000000 1.000000
Pusillimonas sp. T7-7 100.0000 100.000000 1.000000
Planctomyces brasiliensis DSM 5305 100.0000 100.000000 1.000000
Pseudomonas aeruginosa NCGM2.S1 100.0000 100.000000 1.000000
Marinithermus hydrothermalis DSM 14884 100.0000 100.000000 1.000000
Candidatus Liberibacter solanacearum CLso-ZC1 100.0000 100.000000 1.000000
Alteromonas macleodii str. 'Ionian Sea U8' 100.0000 100.000000 1.000000
Isoptericola variabilis 225 100.0000 100.000000 1.000000
Enterobacter cloacae SCF1 100.0000 100.000000 1.000000
butyrate-producing bacterium SM4/1 100.0000 100.000000 1.000000
Cyanothece sp. PCC 7822 100.0000 100.000000 1.000000
Thermoanaerobacterium xylanolyticum LX-11 100.0000 100.000000 1.000000
Pseudomonas fluorescens A506 100.0000 100.000000 1.000000
Methylomonas methanica MC09 100.0000 100.000000 1.000000
Pseudomonas fluorescens F113 100.0000 100.000000 1.000000
Sinorhizobium meliloti AK83 100.0000 100.000000 1.000000
Pseudomonas putida ND6 100.0000 100.000000 1.000000
Staphylococcus pseudintermedius HKU10-03 100.0000 100.000000 1.000000
Serratia sp. AS13 100.0000 100.000000 1.000000
Ureaplasma parvum serovar 3 str. ATCC 700970 99.7900 99.790000 0.946909
Thermaerobacter marianensis DSM 12885 100.0000 100.000000 1.000000
Streptococcus macedonicus ACA-DC 198 100.0000 100.000000 1.000000
Borrelia garinii PBi 99.3600 99.360000 0.924592
Shigella flexneri 2002017 100.0000 100.000000 1.000000
Ictidomys tridecemlineatus 76_2 100.0000 100.000000 1.000000
Pseudomonas putida BIRD-1 100.0000 100.000000 1.000000
Streptococcus sp. I-G2 100.0000 100.000000 1.000000
Gasterosteus aculeatus 76_1 100.0000 100.000000 1.000000
Drosophila grimshawi 1.3 99.9700 99.970000 0.979928
Drosophila erecta 1.3 99.9600 99.960000 0.975192
Giardia lamblia 2.3 98.5200 98.520000 0.909755
Gallus gallus 76_4 99.6400 99.640000 0.936435
Pseudomonas putida DOT-T1E 99.9700 99.970000 0.979928
Aspergillus terreus NIH2624 99.2900 99.290000 0.922593
Pseudomonas putida S16 100.0000 100.000000 1.000000
Chlamydia pecorum PV3056/3 99.9600 99.960000 0.975192
Selaginella moellendorffii 97.2200 97.220000 0.895902
Geobacillus kaustophilus HTA426 99.8800 99.880000 0.957646
Salmonella enterica subsp. enterica serovar Thompson str. RM6836 100.0000 100.000000 1.000000
Candida glabrata CBS138 99.8500 99.850000 0.953608
Streptococcus agalactiae 2-22 100.0000 100.000000 1.000000
Pseudomonas stutzeri ATCC 17588 = LMG 11199 100.0000 100.000000 1.000000
Geobacter metallireducens GS-15 99.9700 99.970000 0.979928
Arthrobacter arilaitensis Re117 100.0000 100.000000 1.000000
Acinetobacter baumannii BJAB07104 100.0000 100.000000 1.000000
Ashbya gossypii ATCC 10895 79.6800 79.680000 0.768323
Microsporum gypseum 67.9300 67.930000 0.680671
Pseudomonas stutzeri CCUG 29243 100.0000 100.000000 1.000000
Aspergillus flavus NRRL3357 55.0300 55.030000 0.576038
Octadecabacter arcticus 238 100.0000 100.000000 1.000000
Magnaporthe grisea 70-15 83.7900 83.790000 0.798216
Geobacter sulfurreducens PCA 99.9800 99.980000 0.985397
Cavia porcellus 76_3 99.9600 99.960000 0.975192
Gloeobacter violaceus PCC 7421 99.5000 99.500000 0.929140
Drosophila willistoni 1.3 99.9400 99.940000 0.967919
Gorilla gorilla 76_3.1 99.9600 99.960000 0.975192
Salmonella enterica subsp. enterica serovar Agona str. 24249 100.0000 100.000000 1.000000
Lottia gigantea 99.7900 99.790000 0.946909
Streptococcus infantarius subsp. infantarius CJ18 99.9100 99.910000 0.961774
Malassezia globosa CBS 7966 99.8800 99.880000 0.957646
Coxiella burnetii CbuG_Q212 99.9300 99.930000 0.965199
Helicobacter pylori HPAG1 99.9600 99.960000 0.975192
Leisingera methylohalidivorans DSM 14336 100.0000 100.000000 1.000000
Francisella tularensis subsp. holarctica FSC200 100.0000 100.000000 1.000000
Chlorella variabilis sp. NC64A 99.7000 99.700000 0.939837
Coprothermobacter proteolyticus DSM 5265 99.8700 99.870000 0.956117
Helicobacter pylori G27 99.9800 99.980000 0.985397
Pseudomonas stutzeri DSM 10701 100.0000 100.000000 1.000000
Shewanella piezotolerans WP3 99.8800 99.880000 0.957646
Fomitopsis pinicola FP-58527 SS1 v3.0 99.5400 99.540000 0.931316
Thermococcus onnurineus NA1 100.0000 100.000000 1.000000
Escherichia coli S88 100.0000 100.000000 1.000000
Staphylococcus pseudintermedius ED99 100.0000 100.000000 1.000000
Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2 100.0000 100.000000 1.000000
Klebsiella pneumoniae 342 100.0000 100.000000 1.000000
Sphaerochaeta globus str. Buddy 100.0000 100.000000 1.000000
Ignisphaera aggregans DSM 17230 100.0000 100.000000 1.000000
Streptococcus parasanguinis ATCC 15912 100.0000 100.000000 1.000000
Asticcacaulis excentricus CB 48 100.0000 100.000000 1.000000
Chlamydophila pecorum E58 100.0000 100.000000 1.000000
Clostridium lentocellum DSM 5427 100.0000 100.000000 1.000000
Candidatus Kinetoplastibacterium crithidii TCC036E 100.0000 100.000000 1.000000
Treponema azotonutricium ZAS-9 100.0000 100.000000 1.000000
Papio anubis 76 46.6900 46.690000 0.503828
Serratia sp. AS12 100.0000 100.000000 1.000000
Ralstonia solanacearum CMR15 99.9800 99.980000 0.985397
Dickeya dadantii 3937 99.9800 99.980000 0.985397
Burkholderia sp. CCGE1003 100.0000 100.000000 1.000000
Pseudomonas stutzeri DSM 4166 100.0000 100.000000 1.000000
Mycoplasma mycoides subsp. capri LC str. 95010 99.9200 99.920000 0.963395
Helicobacter pylori PeCan4 100.0000 100.000000 1.000000
Pseudomonas sp. TKP 100.0000 100.000000 1.000000
Neisseria lactamica 020-06 100.0000 100.000000 1.000000
Halanaerobium hydrogeniformans 100.0000 100.000000 1.000000
Pseudovibrio sp. FO-BEG1 100.0000 100.000000 1.000000
Taylorella asinigenitalis 14/45 100.0000 100.000000 1.000000
Caldicellulosiruptor kristjanssonii 177R1B 100.0000 100.000000 1.000000
Leptospirillum ferriphilum ML-04 100.0000 100.000000 1.000000
Pseudoxanthomonas spadix BD-a59 100.0000 100.000000 1.000000
Desulfovibrio aespoeensis Aspo-2 100.0000 100.000000 1.000000
Pyrobaculum sp. 1860 100.0000 100.000000 1.000000
Methanosaeta concilii GP6 100.0000 100.000000 1.000000
Pyrobaculum oguniense TE7 100.0000 100.000000 1.000000
Pseudomonas brassicacearum subsp. brassicacearum NFM421 99.9900 99.990000 0.992240
Halomonas elongata DSM 2581 99.9400 99.940000 0.967919
Cronobacter sakazakii ATCC BAA-894 99.9400 99.940000 0.967919
Acidiphilium cryptum JF-5 99.9100 99.910000 0.961774
Riemerella anatipestifer ATCC 11845 = DSM 15868 100.0000 100.000000 1.000000
Ilyobacter polytropus DSM 2926 100.0000 100.000000 1.000000
Mycoplasma haemofelis str. Langford 1 100.0000 100.000000 1.000000
Enterococcus faecium NRRL B-2354 100.0000 100.000000 1.000000
Clostridium botulinum BKT015925 100.0000 100.000000 1.000000
Pyrococcus furiosus COM1 100.0000 100.000000 1.000000
Vibrio vulnificus MO6-24/O 100.0000 100.000000 1.000000
Vulcanisaeta moutnovskia 768-28 99.9600 99.960000 0.975192
Pseudoalteromonas haloplanktis TAC125 99.1900 99.190000 0.919580
Halobacterium sp. NRC-1 98.0700 98.070000 0.904244
Hahella chejuensis KCTC 2396 99.6200 99.620000 0.935302
Pyrococcus sp. ST04 100.0000 100.000000 1.000000
Haemophilus ducreyi 35000HP 99.0200 99.020000 0.916124
Pyrococcus yayanosii CH1 100.0000 100.000000 1.000000
Rickettsia typhi str. TH1527 100.0000 100.000000 1.000000
Photobacterium profundum SS9 97.6000 97.600000 0.899606
Haemophilus influenzae 86-028NP 99.7400 99.740000 0.942379
Trichoderma longibrachiatum ATCC 18648 v1.0 3.6200 3.620000 0.052361
Chaetomium globosum CBS 148.51 99.0000 99.000000 0.915723
Streptococcus salivarius JIM8777 100.0000 100.000000 1.000000
Helicobacter hepaticus ATCC 51449 98.8900 98.890000 0.914112
Haemophilus influenzae Rd KW20 99.1100 99.110000 0.917975
Schizosaccharomyces japonicus yFS275 80.0700 80.070000 0.771261
Marinobacter sp. BSs20148 100.0000 100.000000 1.000000
Histoplasma capsulatum class NAmI strain WU24 37.2400 37.240000 0.417447
Pyrolobus fumarii 1A 100.0000 100.000000 1.000000
Rahnella aquatilis CIP 78.65 = ATCC 33071 100.0000 100.000000 1.000000
Helicobacter acinonychis str. Sheeba 99.8200 99.820000 0.951221
Rahnella aquatilis HX2 100.0000 100.000000 1.000000
Haloarcula marismortui ATCC 43049 99.3900 99.390000 0.925331
Phycomyces blakesleeanus 0.7700 0.770000 0.013876
Bartonella henselae str. Houston-1 99.9200 99.920000 0.963395
Propionibacterium acnes C1 100.0000 100.000000 1.000000
Helicobacter pylori 26695 99.8000 99.800000 0.947980
Helicobacter pylori J99 99.9800 99.980000 0.985397
Albugo laibachii 22 100.0000 100.000000 1.000000
Mycoplasma gallisepticum WI01_2001.043-13-2P 100.0000 100.000000 1.000000
Rhodanobacter denitrificans 100.0000 100.000000 1.000000
Homo sapiens 76_38 81.9700 81.970000 0.785228
Mycoplasma hyopneumoniae 7448 71.2400 71.240000 0.705872
Pediculus humanus corporis 100.0000 100.000000 1.000000
Shewanella denitrificans OS217 99.5300 99.530000 0.930795
Helobdella robusta 99.9600 99.960000 0.975192
Tetrahymena thermophila SB210 1 35.6300 35.630000 0.402162
Schistosoma mansoni 53.4500 53.450000 0.562510
Pisolithus tinctorius Marx 270 v1.0 0.1100 0.110000 0.002928
Capitella sp. I 99.2300 99.230000 0.920749
Coccidioides immitis H538.4 28.2500 28.250000 0.329274
Coccidioides immitis RMSCC 2394 45.1500 45.150000 0.490151
Coccidioides immitis RMSCC 3703 26.6200 26.620000 0.312752
Coccidioides posadasii RMSCC 3488 50.7100 50.710000 0.538979
Ralstonia solanacearum Po82 100.0000 100.000000 1.000000
Ramlibacter tataouinensis TTB310 100.0000 100.000000 1.000000
Coccidioides posadasii str. Silveira 99.9900 99.990000 0.992240
Escherichia coli JJ1886 100.0000 100.000000 1.000000
Mesorhizobium ciceri biovar biserrulae WSM1271 100.0000 100.000000 1.000000
Desulfovibrio gigas DSM 1382 = ATCC 19364 100.0000 100.000000 1.000000
Ketogulonicigenium vulgare Y25 99.9800 99.980000 0.985397
Micromonospora sp. L5 100.0000 100.000000 1.000000
Paenibacillus polymyxa SC2 100.0000 100.000000 1.000000
Listeria monocytogenes EGD-e 99.9900 99.990000 0.992240
Amycolatopsis orientalis HCCB10007 100.0000 100.000000 1.000000
Pyrococcus sp. NA2 100.0000 100.000000 1.000000
Rhodospirillum photometricum DSM 122 99.9400 99.940000 0.967919
Candidatus Blochmannia vafer str. BVAF 100.0000 100.000000 1.000000
Caldicellulosiruptor hydrothermalis 108 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus Z172 100.0000 100.000000 1.000000
Calditerrivibrio nitroreducens DSM 19672 100.0000 100.000000 1.000000
Spirochaeta thermophila DSM 6192 100.0000 100.000000 1.000000
Lactobacillus amylovorus GRL 1112 100.0000 100.000000 1.000000
Deinococcus maricopensis DSM 21211 100.0000 100.000000 1.000000
Geobacillus sp. Y412MC52 100.0000 100.000000 1.000000
Bacillus subtilis BSn5 100.0000 100.000000 1.000000
Rhodospirillum rubrum F11 100.0000 100.000000 1.000000
Odoribacter splanchnicus DSM 20712 100.0000 100.000000 1.000000
Bifidobacterium longum subsp. longum JCM 1217 100.0000 100.000000 1.000000
Thermofilum sp. 1910b 100.0000 100.000000 1.000000
Aeromonas veronii B565 100.0000 100.000000 1.000000
Gordonibacter pamelaeae 7-10-1-b 100.0000 100.000000 1.000000
Treponema pallidum subsp. pertenue str. SamoaD 100.0000 100.000000 1.000000
Pedobacter saltans DSM 12145 100.0000 100.000000 1.000000
Variovorax paradoxus EPS 100.0000 100.000000 1.000000
Bigelowiella natans CCMP2755 22 0.4100 0.410000 0.008402
Rhodothermus marinus SG0.5JP17-172 100.0000 100.000000 1.000000
Rahnella sp. Y9602 99.9900 99.990000 0.992240
Desulfobulbus propionicus DSM 2032 100.0000 100.000000 1.000000
Sphaerobolus stellatus v1.0 0.1200 0.120000 0.003236
Alicycliphilus denitrificans K601 99.9900 99.990000 0.992240
Simkania negevensis Z 99.9200 99.920000 0.963395
Methanobacterium sp. AL-21 100.0000 100.000000 1.000000
Eubacterium limosum KIST612 100.0000 100.000000 1.000000
Desulfobacca acetoxidans DSM 11109 99.9700 99.970000 0.979928
Alicycliphilus denitrificans BC 100.0000 100.000000 1.000000
Postia placenta 52.4300 52.430000 0.553846
Leishmania braziliensis MHOM/BR/75/M2904 2.4 80.2100 80.210000 0.772431
Ruegeria sp. TM1040 99.6000 99.600000 0.933893
Rothia dentocariosa ATCC 17931 100.0000 100.000000 1.000000
Culex pipiens quinquefasciatus 99.4000 99.400000 0.925577
Paracoccidioides brasiliensis Pb01 99.9300 99.930000 0.965199
Paracoccidioides brasiliensis Pb03 99.9400 99.940000 0.967919
Tarsius syrichta 76_1 16.1500 16.150000 0.200067
Ixodes scapularis 100.0000 100.000000 1.000000
Micromonas sp. RCC299 87.4900 87.490000 0.824647
Candida parapsilosis 79.9700 79.970000 0.770464
Idiomarina loihiensis L2TR 99.9000 99.900000 0.960154
Prevotella dentalis DSM 3688 100.0000 100.000000 1.000000
Coccidioides immitis RS 98.4800 98.480000 0.909318
Dipodomys ordii 76_1 24.7700 24.770000 0.293585
Microcebus murinus 76_1 22.7100 22.710000 0.271870
Rickettsia australis str. Cutlack 100.0000 100.000000 1.000000
Pichia stipitis CBS 6054 28.3400 28.340000 0.330359
Micromonas pusilla CCMP1545 v3.0 80.5700 80.570000 0.775149
Paramecium tetraurelia 98.6500 98.650000 0.911403
Ciona intestinalis 76 99.9900 99.990000 0.992240
Candida lusitaniae ATCC 42720 99.9000 99.900000 0.960154
Staphylococcus aureus 04-02981 100.0000 100.000000 1.000000
Paracoccidioides brasiliensis Pb18 99.9600 99.960000 0.975192
Candida albicans WO-1 98.2300 98.230000 0.906267
Dictyoglomus turgidum DSM 6724 100.0000 100.000000 1.000000
Phytophthora infestans T30-4 73.8200 73.820000 0.725675
Schizosaccharomyces pombe 972h- 92.5300 92.530000 0.860448
Natranaerobius thermophilus JW/NM-WN-LF 99.9300 99.930000 0.965199
Francisella tularensis subsp. holarctica LVS 99.9900 99.990000 0.992240
Ajellomyces dermatitidis SLH14081 99.9900 99.990000 0.992240
Lactococcus lactis subsp. cremoris UC509.9 100.0000 100.000000 1.000000
Clostridium botulinum E3 str. Alaska E43 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 100.0000 100.000000 1.000000
Methylobacterium chloromethanicum CM4 99.9800 99.980000 0.985397
Anoxybacillus flavithermus WK1 99.6900 99.690000 0.938858
Salmonella enterica subsp. enterica serovar Agona str. SL483 100.0000 100.000000 1.000000
Shewanella baltica OS223 99.9800 99.980000 0.985397
Anaeromyxobacter sp. K 100.0000 100.000000 1.000000
Desulfurispirillum indicum S5 100.0000 100.000000 1.000000
Vulcanisaeta distributa DSM 14429 100.0000 100.000000 1.000000
Deinococcus proteolyticus MRP 100.0000 100.000000 1.000000
Methanothermobacter thermautotrophicus str. Delta H 95.7800 95.780000 0.884478
Desulfotomaculum carboxydivorans CO-1-SRB 100.0000 100.000000 1.000000
Rickettsia canadensis str. CA410 100.0000 100.000000 1.000000
Microbacterium testaceum StLB037 100.0000 100.000000 1.000000
Methanoplanus petrolearius DSM 11571 100.0000 100.000000 1.000000
Candidatus Pelagibacter sp. IMCC9063 100.0000 100.000000 1.000000
Rickettsia heilongjiangensis 054 100.0000 100.000000 1.000000
Krokinobacter sp. 4H-3-7-5 100.0000 100.000000 1.000000
Zobellia galactanivorans 99.6600 99.660000 0.937203
Rickettsia japonica YH 99.9400 99.940000 0.967919
Helicobacter felis ATCC 49179 99.7000 99.700000 0.939837
Rickettsia massiliae str. AZT80 100.0000 100.000000 1.000000
Mycobacterium canettii CIPT 140070010 100.0000 100.000000 1.000000
Bacteroides helcogenes P 36-108 100.0000 100.000000 1.000000
Methanocaldococcus jannaschii DSM 2661 95.0500 95.050000 0.878765
Ehrlichia muris AS145 100.0000 100.000000 1.000000
Bifidobacterium longum subsp. longum F8 100.0000 100.000000 1.000000
Lactobacillus plantarum subsp. plantarum ST-III 100.0000 100.000000 1.000000
Methanobacterium sp. SWAN-1 100.0000 100.000000 1.000000
Rickettsia montanensis str. OSU 85-930 100.0000 100.000000 1.000000
Paludibacter propionicigenes WB4 100.0000 100.000000 1.000000
Ethanoligenens harbinense YUAN-3 100.0000 100.000000 1.000000
Bordetella parapertussis 18323 100.0000 100.000000 1.000000
Frankia sp. EuI1c 100.0000 100.000000 1.000000
Carnobacterium sp. 17-4 100.0000 100.000000 1.000000
Oryza punctata 22 5.0900 5.090000 0.070976
Mycoplasma bovis PG45 100.0000 100.000000 1.000000
Anaplasma marginale str. Dawn 100.0000 100.000000 1.000000
Rickettsia parkeri str. Portsmouth 100.0000 100.000000 1.000000
Lactobacillus reuteri TD1 100.0000 100.000000 1.000000
Bifidobacterium bifidum PRL2010 100.0000 100.000000 1.000000
Alteromonas macleodii str. 'Ionian Sea U7' 99.9900 99.990000 0.992240
Leadbetterella byssophila DSM 17132 100.0000 100.000000 1.000000
Thermoanaerobacter sp. X513 100.0000 100.000000 1.000000
Stigmatella aurantiaca DW4/3-1 100.0000 100.000000 1.000000
Mycoplasma suis str. Illinois 100.0000 100.000000 1.000000
Bacillus cellulosilyticus DSM 2522 100.0000 100.000000 1.000000
Jannaschia sp. CCS1 99.5600 99.560000 0.932358
Chloroflexus aggregans DSM 9485 99.9700 99.970000 0.979928
Streptococcus equi subsp. zooepidemicus MGCS10565 99.9600 99.960000 0.975192
Borrelia burgdorferi ZS7 100.0000 100.000000 1.000000
Campylobacter jejuni RM1221 100.0000 100.000000 1.000000
Acinetobacter baumannii AB307-0294 100.0000 100.000000 1.000000
Bacillus cereus AH187 100.0000 100.000000 1.000000
Rickettsia philipii str. 364D 100.0000 100.000000 1.000000
Arthrobacter phenanthrenivorans Sphe3 100.0000 100.000000 1.000000
Cyanothece sp. PCC 7424 100.0000 100.000000 1.000000
Oscillatoria nigro-viridis PCC 7112 100.0000 100.000000 1.000000
Oligotropha carboxidovorans OM5 100.0000 100.000000 1.000000
Corynebacterium jeikeium K411 99.2500 99.250000 0.921608
Rickettsia prowazekii str. BuV67-CWPP 100.0000 100.000000 1.000000
Coriobacterium glomerans PW2 100.0000 100.000000 1.000000
Acidianus hospitalis W1 100.0000 100.000000 1.000000
Proteus mirabilis HI4320 99.9900 99.990000 0.992240
Escherichia coli IAI1 100.0000 100.000000 1.000000
Thermus thermophilus JL-18 100.0000 100.000000 1.000000
Escherichia coli UMN026 100.0000 100.000000 1.000000
Bifidobacterium longum subsp. longum BBMN68 100.0000 100.000000 1.000000
Rickettsia prowazekii str. Chernikova 100.0000 100.000000 1.000000
Thermosipho africanus TCF52B 99.9600 99.960000 0.975192
Xanthomonas oryzae pv. oryzae PXO99A 99.2000 99.200000 0.920193
Thermogladius cellulolyticus 1633 100.0000 100.000000 1.000000
Desulfovibrio vulgaris str. 'Miyazaki F' 100.0000 100.000000 1.000000
Serratia symbiotica str. 'Cinara cedri' 100.0000 100.000000 1.000000
Geobacter bemidjiensis Bem 99.5400 99.540000 0.931316
Chlamydia trachomatis L2b/Canada2 100.0000 100.000000 1.000000
Xanthomonas campestris pv. campestris str. B100 99.8000 99.800000 0.947980
Rickettsia prowazekii str. Dachau 100.0000 100.000000 1.000000
Rhizobium leguminosarum bv. trifolii WSM2304 100.0000 100.000000 1.000000
Escherichia coli O127:H6 str. E2348/69 100.0000 100.000000 1.000000
Helicobacter pylori Rif2 100.0000 100.000000 1.000000
Aliivibrio salmonicida LFI1238 99.8800 99.880000 0.957646
Bacillus cereus AH820 100.0000 100.000000 1.000000
Acinetobacter baumannii ZW85-1 100.0000 100.000000 1.000000
Dictyoglomus thermophilum H-6-12 100.0000 100.000000 1.000000
Acinetobacter baumannii AB0057 100.0000 100.000000 1.000000
Helicobacter pylori P12 100.0000 100.000000 1.000000
uncultured Termite group 1 bacterium phylotype Rs-D17 99.7400 99.740000 0.942379
Thermodesulfovibrio yellowstonii DSM 11347 99.5600 99.560000 0.932358
Buchnera aphidicola str. 5A (Acyrthosiphon pisum) 100.0000 100.000000 1.000000
Escherichia coli ED1a 100.0000 100.000000 1.000000
Rickettsia prowazekii str. GvV257 100.0000 100.000000 1.000000
Rickettsia prowazekii str. Katsinyian 100.0000 100.000000 1.000000
Rickettsia prowazekii Rp22 100.0000 100.000000 1.000000
Streptococcus suis ST3 100.0000 100.000000 1.000000
Cellulophaga lytica DSM 7489 100.0000 100.000000 1.000000
Rickettsia prowazekii str. RpGvF24 100.0000 100.000000 1.000000
Terriglobus saanensis SP1PR4 100.0000 100.000000 1.000000
Haemophilus influenzae F3047 99.9500 99.950000 0.971280
Rickettsia rhipicephali str. 3-7-female6-CWPP 100.0000 100.000000 1.000000
Streptococcus parauberis KCTC 11537 100.0000 100.000000 1.000000
Taylorella equigenitalis MCE9 100.0000 100.000000 1.000000
Rickettsia rickettsii str. Arizona 100.0000 100.000000 1.000000
Rickettsia rickettsii str. Brazil 100.0000 100.000000 1.000000
Porphyromonas gingivalis TDC60 100.0000 100.000000 1.000000
Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069 100.0000 100.000000 1.000000
Aerococcus urinae ACS-120-V-Col10a 100.0000 100.000000 1.000000
Syntrophobotulus glycolicus DSM 8271 100.0000 100.000000 1.000000
Prochlorococcus marinus subsp. pastoris str. CCMP1986 99.5000 99.500000 0.929140
Alteromonas sp. SN2 99.9800 99.980000 0.985397
Sphingobacterium sp. 21 100.0000 100.000000 1.000000
Methanotorris igneus Kol 5 100.0000 100.000000 1.000000
Marinomonas mediterranea MMB-1 100.0000 100.000000 1.000000
Lactobacillus acidophilus 30SC 100.0000 100.000000 1.000000
Mycoplasma fermentans JER 100.0000 100.000000 1.000000
Maribacter sp. HTCC2170 100.0000 100.000000 1.000000
Pseudomonas aeruginosa RP73 100.0000 100.000000 1.000000
Porphyromonas asaccharolytica DSM 20707 100.0000 100.000000 1.000000
Fluviicola taffensis DSM 16823 100.0000 100.000000 1.000000
Paenibacillus polymyxa E681 100.0000 100.000000 1.000000
Agrobacterium sp. H13-3 100.0000 100.000000 1.000000
Weeksella virosa DSM 16922 100.0000 100.000000 1.000000
Cenarchaeum symbiosum A 99.5000 99.500000 0.929140
Adlercreutzia equolifaciens DSM 19450 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91 100.0000 100.000000 1.000000
Alteromonas macleodii str. 'Deep ecotype' 100.0000 100.000000 1.000000
Thermodesulfobium narugense DSM 14796 100.0000 100.000000 1.000000
Rickettsia rickettsii str. Colombia 100.0000 100.000000 1.000000
Escherichia fergusonii ATCC 35469 100.0000 100.000000 1.000000
Rickettsia rickettsii str. Hauke 100.0000 100.000000 1.000000
Methylocella silvestris BL2 99.9700 99.970000 0.979928
Rhodospirillum centenum SW 100.0000 100.000000 1.000000
Streptococcus pneumoniae INV104 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601 100.0000 100.000000 1.000000
Acidithiobacillus ferrooxidans ATCC 53993 100.0000 100.000000 1.000000
Rickettsia rickettsii str. Hino 100.0000 100.000000 1.000000
Acidithiobacillus ferrooxidans ATCC 23270 100.0000 100.000000 1.000000
Acetobacterium woodii DSM 1030 100.0000 100.000000 1.000000
Phenylobacterium zucineum HLK1 100.0000 100.000000 1.000000
Megamonas hypermegale 100.0000 100.000000 1.000000
Klebsiella pneumoniae subsp. rhinoscleromatis SB3432 99.8700 99.870000 0.956117
Kluyveromyces lactis 99.6700 99.670000 0.937724
Thermoanaerobacterium thermosaccharolyticum M0795 100.0000 100.000000 1.000000
Thellungiella halophila v173 99.1400 99.140000 0.918623
Haemophilus parasuis SH0165 99.9500 99.950000 0.971280
Acetobacter pasteurianus IFO 3283-01-42C 100.0000 100.000000 1.000000
Vibrio splendidus LGP32 99.9200 99.920000 0.963395
Bacillus thuringiensis serovar konkukian str. 97-27 99.9900 99.990000 0.992240
Acetobacter pasteurianus IFO 3283-03 100.0000 100.000000 1.000000
Acetobacter pasteurianus IFO 3283-07 100.0000 100.000000 1.000000
Bacillus cereus B4264 100.0000 100.000000 1.000000
Ralstonia pickettii 12J 100.0000 100.000000 1.000000
Candidatus Phytoplasma australiense 100.0000 100.000000 1.000000
Candidatus Mycoplasma haemolamae str. Purdue 100.0000 100.000000 1.000000
Burkholderia cenocepacia J2315 99.9900 99.990000 0.992240
Escherichia coli 55989 100.0000 100.000000 1.000000
Burkholderia phytofirmans PsJN 99.9500 99.950000 0.971280
Lactobacillus reuteri JCM 1112 100.0000 100.000000 1.000000
Acetobacter pasteurianus IFO 3283-12 100.0000 100.000000 1.000000
Acetobacter pasteurianus IFO 3283-22 100.0000 100.000000 1.000000
Kluyveromyces waltii 1.9400 1.940000 0.030045
Streptococcus dysgalactiae subsp. equisimilis 167 100.0000 100.000000 1.000000
Escherichia coli SE11 100.0000 100.000000 1.000000
Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) 100.0000 100.000000 1.000000
Rickettsia prowazekii str. Breinl 100.0000 100.000000 1.000000
Thermoproteus uzoniensis 768-20 100.0000 100.000000 1.000000
Eubacterium rectale M104/1 100.0000 100.000000 1.000000
Acetobacter pasteurianus IFO 3283-26 100.0000 100.000000 1.000000
Bacillus subtilis XF-1 100.0000 100.000000 1.000000
Acetobacter pasteurianus IFO 3283-32 100.0000 100.000000 1.000000
Alternaria brassicicola 1.7600 1.760000 0.027651
Candidatus Portiera aleyrodidarum TV 100.0000 100.000000 1.000000
Arabidopsis lyrata 99.4900 99.490000 0.928619
Ajellomyces dermatitidis ER-3 99.9900 99.990000 0.992240
Cellulophaga algicola DSM 14237 100.0000 100.000000 1.000000
Burkholderia sp. CCGE1001 100.0000 100.000000 1.000000
Burkholderia pseudomallei NCTC 13179 100.0000 100.000000 1.000000
Thermus scotoductus SA-01 100.0000 100.000000 1.000000
Halogeometricum borinquense DSM 11551 100.0000 100.000000 1.000000
Isosphaera pallida ATCC 43644 100.0000 100.000000 1.000000
Streptococcus pasteurianus ATCC 43144 100.0000 100.000000 1.000000
Metallosphaera cuprina Ar-4 100.0000 100.000000 1.000000
Haemophilus influenzae F3031 100.0000 100.000000 1.000000
Faecalibacterium prausnitzii 100.0000 100.000000 1.000000
Methylovorus sp. MP688 100.0000 100.000000 1.000000
Yersinia enterocolitica subsp. palearctica 105.5R(r) 100.0000 100.000000 1.000000
Verrucosispora maris AB-18-032 100.0000 100.000000 1.000000
Sulfurimonas autotrophica DSM 16294 100.0000 100.000000 1.000000
Mycoplasma leachii PG50 100.0000 100.000000 1.000000
Sulfurimonas denitrificans DSM 1251 99.7100 99.710000 0.940633
Acidiphilium multivorum AIU301 100.0000 100.000000 1.000000
Melissococcus plutonius ATCC 35311 100.0000 100.000000 1.000000
Desulfotomaculum gibsoniae DSM 7213 100.0000 100.000000 1.000000
Pleurocapsa minor Pleurocapsa sp. PCC 7327 100.0000 100.000000 1.000000
Acidaminococcus intestini RyC-MR95 100.0000 100.000000 1.000000
Pseudomonas putida HB3267 100.0000 100.000000 1.000000
Streptococcus pneumoniae gamPNI0373 100.0000 100.000000 1.000000
Acidithiobacillus caldus SM-1 100.0000 100.000000 1.000000
Acidithiobacillus ferrivorans SS3 100.0000 100.000000 1.000000
Candidatus Methanomethylophilus alvus Mx1201 96.1400 96.140000 0.887341
Helicobacter pylori Rif1 100.0000 100.000000 1.000000
Acinetobacter baumannii 1656-2 100.0000 100.000000 1.000000
Acinetobacter baumannii MDR-TJ 100.0000 100.000000 1.000000
Listeria monocytogenes serotype 4b str. F2365 99.9900 99.990000 0.992240
Babela massiliensis 100.0000 100.000000 1.000000
Lactobacillus plantarum WCFS1 99.9500 99.950000 0.971280
Alteromonas macleodii str. 'Ionian Sea U4' 99.9800 99.980000 0.985397
Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842 99.9500 99.950000 0.971280
Legionella pneumophila str. Paris 99.9900 99.990000 0.992240
Acinetobacter baumannii MDR-ZJ06 100.0000 100.000000 1.000000
Bacillus licheniformis DSM 13 = ATCC 14580 99.9500 99.950000 0.971280
Treponema pallidum subsp. pallidum str. Mexico A 100.0000 100.000000 1.000000
Campylobacter jejuni subsp. jejuni 00-2426 100.0000 100.000000 1.000000
Legionella pneumophila str. Lens 99.9400 99.940000 0.967919
Leishmania infantum JPCM5 2.4 94.5600 94.560000 0.874955
Listeria innocua Clip11262 99.9600 99.960000 0.975192
Lactobacillus johnsonii NCC 533 99.8100 99.810000 0.949783
Loxodonta africana 76_3 100.0000 100.000000 1.000000
Lactococcus lactis subsp. lactis Il1403 99.7500 99.750000 0.943175
Lawsonia intracellularis PHE/MN1-00 99.8000 99.800000 0.947980
Acinetobacter baumannii TCDC-AB0715 100.0000 100.000000 1.000000
Acinetobacter calcoaceticus PHEA-2 100.0000 100.000000 1.000000
Laccaria bicolor S238N-H82 87.2900 87.290000 0.823205
Helicobacter pylori SJM180 100.0000 100.000000 1.000000
Emticicia oligotrophica DSM 17448 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Heidelberg str. B182 100.0000 100.000000 1.000000
Tremella mesenterica 17.8600 17.860000 0.219268
Actinoplanes missouriensis 431 100.0000 100.000000 1.000000
Actinobacillus suis H91-0380 100.0000 100.000000 1.000000
Leptospira interrogans serovar Lai str. 56601 100.0000 100.000000 1.000000
Actinoplanes sp. SE50/110 99.4900 99.490000 0.928619
Lactobacillus sakei subsp. sakei 23K 99.7500 99.750000 0.943175
Lactobacillus acidophilus NCFM 99.9900 99.990000 0.992240
Glomerella graminicola 22 100.0000 100.000000 1.000000
Myotis lucifugus 76_2.0 100.0000 100.000000 1.000000
Lactobacillus salivarius UCC118 99.9800 99.980000 0.985397
Colwellia psychrerythraea 34H 99.5300 99.530000 0.930795
Leifsonia xyli subsp. xyli str. CTCB07 99.1700 99.170000 0.919270
Chlamydia trachomatis D/SotonD5 100.0000 100.000000 1.000000
Lodderomyces elongisporus NRRL YB-4239 99.8100 99.810000 0.949783
Advenella kashmirensis WT001 100.0000 100.000000 1.000000
Sclerotinia sclerotiorum 99.4000 99.400000 0.925577
Mycoplasma mobile 163K 97.8000 97.800000 0.901704
Aequorivita sublithincola DSM 14238 100.0000 100.000000 1.000000
Strigamia maritima 22 100.0000 100.000000 1.000000
Campylobacter jejuni subsp. jejuni PT14 100.0000 100.000000 1.000000
Myxococcus xanthus DK 1622 99.8600 99.860000 0.954679
Methanococcus maripaludis S2 99.3000 99.300000 0.922748
Methanosphaera stadtmanae DSM 3091 99.6100 99.610000 0.934872
Magnetospirillum magneticum AMB-1 99.3300 99.330000 0.923578
Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1 100.0000 100.000000 1.000000
Aggregatibacter actinomycetemcomitans ANH9381 100.0000 100.000000 1.000000
Methanospirillum hungatei JF-1 99.7100 99.710000 0.940633
Methylobacillus flagellatus KT 99.2700 99.270000 0.922100
Moorella thermoacetica ATCC 39073 99.7600 99.760000 0.944521
Listeria monocytogenes SLCC2540 100.0000 100.000000 1.000000
Methanococcoides burtonii DSM 6242 99.6000 99.600000 0.933893
Mesoplasma florum W37 100.0000 100.000000 1.000000
Streptococcus pyogenes Alab49 100.0000 100.000000 1.000000
Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1 100.0000 100.000000 1.000000
Alistipes finegoldii DSM 17242 100.0000 100.000000 1.000000
Amycolatopsis mediterranei S699 100.0000 100.000000 1.000000
Chlamydia trachomatis IU824 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus CN1 100.0000 100.000000 1.000000
Anaerobaculum mobile DSM 13181 100.0000 100.000000 1.000000
Mycobacterium canettii CIPT 140070017 100.0000 100.000000 1.000000
Butyrivibrio fibrisolvens 100.0000 100.000000 1.000000
Arcobacter butzleri ED-1 100.0000 100.000000 1.000000
Arcobacter sp. L 100.0000 100.000000 1.000000
Azospirillum brasilense Sp245 100.0000 100.000000 1.000000
Pseudomonas aeruginosa B136-33 100.0000 100.000000 1.000000
Mixia osmundae IAM 14324 v1.0 72.6900 72.690000 0.716994
Methanosarcina acetivorans C2A 98.7100 98.710000 0.912149
Echinococcus multilocularis 99.0200 99.020000 0.916124
Mycobacterium tuberculosis H37Rv 99.9900 99.990000 0.992240
Azospirillum lipoferum 4B 100.0000 100.000000 1.000000
Mycobacterium bovis AF2122/97 100.0000 100.000000 1.000000
Burkholderia thailandensis MSMB121 100.0000 100.000000 1.000000
Roseobacter litoralis Och 149 100.0000 100.000000 1.000000
Mycoplasma penetrans HF-2 98.4600 98.460000 0.908917
Mesoplasma florum L1 99.7600 99.760000 0.944521
Mycoplasma genitalium G37 99.2800 99.280000 0.922255
Bacillus amyloliquefaciens LL3 100.0000 100.000000 1.000000
Bacillus amyloliquefaciens subsp. plantarum CAU B946 100.0000 100.000000 1.000000
Mycoplasma mycoides subsp. mycoides SC str. PG1 99.3900 99.390000 0.925331
Bacillus toyonensis BCT-7112 100.0000 100.000000 1.000000
Bacillus amyloliquefaciens subsp. plantarum YAU B9601-Y2 100.0000 100.000000 1.000000
Mesorhizobium loti MAFF303099 99.4100 99.410000 0.926190
Mycobacterium leprae TN 99.6200 99.620000 0.935302
Mus musculus 76_38 89.5600 89.560000 0.839721
Methanopyrus kandleri AV19 98.9400 98.940000 0.914886
Mycoplasma pneumoniae M129 99.4000 99.400000 0.925577
Mycoplasma pulmonis UAB CTIP 97.5700 97.570000 0.899232
Bacillus amyloliquefaciens TA208 100.0000 100.000000 1.000000
Staphylococcus aureus ST228/18412 100.0000 100.000000 1.000000
Macropus eugenii 76_1.0 15.8400 15.840000 0.196477
Methylococcus capsulatus str. Bath 99.1900 99.190000 0.919580
Bdellovibrio bacteriovorus str. Tiberius 100.0000 100.000000 1.000000
Mycobacterium tuberculosis CDC1551 99.9100 99.910000 0.961774
Bacillus amyloliquefaciens XH7 100.0000 100.000000 1.000000
Medicago truncatula 41.8700 41.870000 0.460447
Mycoplasma hyopneumoniae J 69.5500 69.550000 0.693119
Corynebacterium glutamicum MB001 100.0000 100.000000 1.000000
Mycoplasma gallisepticum str. R(low) 100.0000 100.000000 1.000000
Methanosarcina mazei Go1 98.4400 98.440000 0.908515
Cryptococcus neoformans B-3501A 99.5800 99.580000 0.933034
Bacillus amyloliquefaciens Y2 100.0000 100.000000 1.000000
Cryptococcus neoformans var. grubii H99 62.7300 62.730000 0.639781
Neurospora discreta FGSC 8579 9.5100 9.510000 0.124161
Bacillus anthracis str. H9401 100.0000 100.000000 1.000000
Neurospora tetrasperma 88.4100 88.410000 0.831296
Bacillus cereus F837/76 100.0000 100.000000 1.000000
Bacillus cereus NC7401 100.0000 100.000000 1.000000
Geobacillus sp. GHH01 100.0000 100.000000 1.000000
alpha proteobacterium HIMB59 100.0000 100.000000 1.000000
Bacillus coagulans 2-6 100.0000 100.000000 1.000000
Bacillus coagulans 36D1 100.0000 100.000000 1.000000
Bacillus cereus FRI-35 100.0000 100.000000 1.000000
Bacillus sp. JS 100.0000 100.000000 1.000000
Caldisphaera lagunensis DSM 15908 100.0000 100.000000 1.000000
Bacillus megaterium WSH-002 100.0000 100.000000 1.000000
Bacillus subtilis subsp. subtilis str. RO-NN-1 100.0000 100.000000 1.000000
Bacillus subtilis subsp. spizizenii TU-B-10 100.0000 100.000000 1.000000
Bacillus thuringiensis serovar chinensis CT-43 100.0000 100.000000 1.000000
Bacillus thuringiensis serovar finitimus YBT-020 100.0000 100.000000 1.000000
Halyomorpha halys symbiont 100.0000 100.000000 1.000000
Nanoarchaeum equitans Kin4-M 97.4100 97.410000 0.897480
Nitrobacter hamburgensis X14 99.5500 99.550000 0.932203
Neorickettsia sennetsu str. Miyayama 99.2600 99.260000 0.921946
Stagonospora nodorum 56.3300 56.330000 0.587129
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 99.9800 99.980000 0.985397
Nitrosomonas europaea ATCC 19718 99.2400 99.240000 0.921270
Nocardia farcinica IFM 10152 99.5800 99.580000 0.933034
Candida guilliermondii ATCC 6260 99.4300 99.430000 0.926866
Neosartorya fischeri NRRL 181 99.6100 99.610000 0.934872
Mycoplasma cynos C142 100.0000 100.000000 1.000000
Neisseria gonorrhoeae FA 1090 99.9600 99.960000 0.975192
Trichoderma virens Gv29-8 67.5100 67.510000 0.677378
Anolis carolinensis 76_2.0 100.0000 100.000000 1.000000
Nitrosospira multiformis ATCC 25196 99.1500 99.150000 0.918778
Neisseria meningitidis MC58 99.9800 99.980000 0.985397
Neisseria meningitidis Z2491 99.9900 99.990000 0.992240
Bacteriovorax marinus SJ 99.9700 99.970000 0.979928
Nostoc sp. PCC 7120 99.1800 99.180000 0.919425
Natronomonas pharaonis DSM 2160 95.1200 95.120000 0.879309
Podospora anserina 92.3200 92.320000 0.858797
Staphylococcus aureus Bmb9393 100.0000 100.000000 1.000000
Nitrosococcus oceani ATCC 19707 99.9000 99.900000 0.960154
Neurospora crassa OR74A 92.6600 92.660000 0.861575
Thiobacillus denitrificans ATCC 25259 99.5100 99.510000 0.929844
Theileria annulata 99.7400 99.740000 0.942379
Novosphingobium aromaticivorans DSM 12444 99.7500 99.750000 0.943175
Bacteroides fragilis 638R 100.0000 100.000000 1.000000
Streptococcus oligofermentans AS 1.3089 100.0000 100.000000 1.000000
Nematostella vectensis 1.0 91.5500 91.550000 0.853551
Nectria haematococca mpVI 99.9300 99.930000 0.965199
Candidatus Blochmannia pennsylvanicus str. BPEN 100.0000 100.000000 1.000000
Nasonia vitripennis 99.0700 99.070000 0.917081
Anopheles darlingi 22 100.0000 100.000000 1.000000
Babesia bovis T2Bo 99.7700 99.770000 0.945408
alpha proteobacterium HIMB5 100.0000 100.000000 1.000000
Desulfocapsa sulfexigens DSM 10523 100.0000 100.000000 1.000000
Trypanosoma congolense 2.4 92.4900 92.490000 0.860094
Mannheimia haemolytica D174 100.0000 100.000000 1.000000
Belliella baltica DSM 15883 100.0000 100.000000 1.000000
Trichophyton equinum CBS 127.97 80.1000 80.100000 0.771564
Chlamydia trachomatis D/SotonD1 100.0000 100.000000 1.000000
Ostreococcus sp. RCC809 0.2200 0.220000 0.005306
Bifidobacterium animalis subsp. animalis ATCC 25527 100.0000 100.000000 1.000000
Schizosaccharomyces octosporus yFS286 86.8100 86.810000 0.819867
Bifidobacterium animalis subsp. lactis B420 100.0000 100.000000 1.000000
Aspergillus tubingensis v1.0 8.3600 8.360000 0.110624
Acinetobacter baumannii D1279779 100.0000 100.000000 1.000000
Streptococcus salivarius CCHSS3 100.0000 100.000000 1.000000
Otolemur garnettii 76_3 100.0000 100.000000 1.000000
Prochlorococcus marinus str. NATL2A 99.6000 99.600000 0.933893
Oryza sativa ssp. Indica 51.6500 51.650000 0.547067
Pongo abelii 76_2 99.7400 99.740000 0.942379
Sodalis glossinidius str. 'morsitans' 99.8100 99.810000 0.949783
Ornithorhynchus anatinus 76_5 100.0000 100.000000 1.000000
Bifidobacterium animalis subsp. lactis BB-12 100.0000 100.000000 1.000000
Oceanobacillus iheyensis HTE831 98.0600 98.060000 0.904089
Sorghum bicolor 95.5200 95.520000 0.882347
Oryctolagus cuniculus 76_2 99.8800 99.880000 0.957646
Oryzias latipes 76_1 99.9900 99.990000 0.992240
Bombyx mori 14.2000 14.200000 0.178039
Shigella sonnei Ss046 100.0000 100.000000 1.000000
Monodelphis domestica 76_5 99.9800 99.980000 0.985397
Ochotona princeps 76 21.4200 21.420000 0.258241
Coprinopsis cinerea okayama7 130 v3 99.9000 99.900000 0.960154
Oryza sativa ssp. japonica 5.0 73.3400 73.340000 0.722059
Ostreococcus tauri 53.9900 53.990000 0.567207
Helicobacter pylori 26695 99.8000 99.800000 0.947980
Monosiga brevicollis 99.1500 99.150000 0.918778
Gluconobacter oxydans 621H 98.8300 98.830000 0.913366
Candidatus Kinetoplastibacterium desouzaii TCC079E 100.0000 100.000000 1.000000
Onion yellows phytoplasma OY-M 98.1200 98.120000 0.905111
Ostreococcus lucimarinus CCE9901 96.1900 96.190000 0.888029
Bifidobacterium animalis subsp. lactis Bi-07 100.0000 100.000000 1.000000
Candidatus Protochlamydia amoebophila UWE25 98.9700 98.970000 0.915259
Capsella rubella v183 99.1100 99.110000 0.917975
Prochlorococcus marinus str. MIT 9313 98.9100 98.910000 0.914421
Streptococcus constellatus subsp. pharyngis C232 100.0000 100.000000 1.000000
Picrophilus torridus DSM 9790 99.2200 99.220000 0.920594
Puccinia graminis f. sp. tritici CRL 75-36-700-3 30.1000 30.100000 0.348051
Gossypium raimondii v221 3.5600 3.560000 0.051542
Polaromonas sp. JS666 99.7400 99.740000 0.942379
Chlorobium luteolum DSM 273 99.0400 99.040000 0.916617
Pelobacter carbinolicus DSM 2380 99.8800 99.880000 0.957646
Prochlorococcus marinus str. MIT 9312 99.4900 99.490000 0.928619
Ralstonia solanacearum FQY_4 100.0000 100.000000 1.000000
Streptococcus agalactiae GD201008-001 100.0000 100.000000 1.000000
Dehalococcoides mccartyi GY50 100.0000 100.000000 1.000000
Bifidobacterium animalis subsp. lactis BLC1 100.0000 100.000000 1.000000
Chlamydia trachomatis RC-F(s)/342 100.0000 100.000000 1.000000
Bifidobacterium animalis subsp. lactis CNCM I-2494 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Typhimurium var. 5- str. CFSAN001921 100.0000 100.000000 1.000000
Bifidobacterium animalis subsp. lactis V9 100.0000 100.000000 1.000000
Solanum tuberosum 99.8700 99.870000 0.956117
Bifidobacterium bifidum BGN4 100.0000 100.000000 1.000000
Bifidobacterium breve ACS-071-V-Sch8b 100.0000 100.000000 1.000000
Alteromonas macleodii ATCC 27126 100.0000 100.000000 1.000000
Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 99.9800 99.980000 0.985397
Pseudomonas aeruginosa PAO1 100.0000 100.000000 1.000000
Pyrococcus abyssi GE5 96.1700 96.170000 0.887717
Pyrobaculum aerophilum str. IM2 99.0100 99.010000 0.915878
Streptomyces hygroscopicus subsp. jinggangensis TL01 100.0000 100.000000 1.000000
Photorhabdus luminescens subsp. laumondii TTO1 99.7700 99.770000 0.945408
Burkholderia pseudomallei K96243 99.9600 99.960000 0.975192
Porphyromonas gingivalis W83 99.8600 99.860000 0.954679
Streptococcus pyogenes MGAS1882 100.0000 100.000000 1.000000
Pyrococcus horikoshii OT3 86.0300 86.030000 0.814204
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 100.0000 100.000000 1.000000
Pseudomonas syringae pv. tomato str. DC3000 99.9200 99.920000 0.963395
Streptococcus pyogenes MGAS9429 99.9500 99.950000 0.971280
Plasmodium falciparum 3D7 99.4900 99.490000 0.928619
Pasteurella multocida subsp. multocida str. Pm70 99.8300 99.830000 0.952017
Pseudomonas fluorescens Pf0-1 99.8000 99.800000 0.947980
Bifidobacterium longum subsp. longum KACC 91563 100.0000 100.000000 1.000000
Schizosaccharomyces pombe 92.9500 92.950000 0.863747
Streptococcus pyogenes MGAS2096 99.9300 99.930000 0.965199
Pseudomonas entomophila L48 99.9000 99.900000 0.960154
Prochlorococcus marinus subsp. marinus str. CCMP1375 99.6900 99.690000 0.938858
Blastococcus saxobsidens DD2 100.0000 100.000000 1.000000
Pseudomonas putida KT2440 99.7500 99.750000 0.943175
Populus trichocarpa v156 98.3200 98.320000 0.907113
Blattabacterium sp. (Blaberus giganteus) 100.0000 100.000000 1.000000
Pyrococcus furiosus DSM 3638 96.3200 96.320000 0.888954
Theileria parva 99.9000 99.900000 0.960154
Blattabacterium sp. (Cryptocercus punctulatus) str. Cpu 100.0000 100.000000 1.000000
Physcomitrella patens 97.0100 97.010000 0.894195
Pseudoalteromonas atlantica T6c 99.8300 99.830000 0.952017
Plasmodium yoelii ssp. yoelii 1 98.2600 98.260000 0.906549
Psychrobacter cryohalolentis K5 99.3800 99.380000 0.924902
Acremonium alcalophilum v 1.0 2.1500 2.150000 0.032987
Bifidobacterium animalis subsp. lactis Bl12 100.0000 100.000000 1.000000
Coniophora puteana 8.0100 8.010000 0.106261
Dichomitus squalens 58.6300 58.630000 0.606242
Dothistroma septosporum 98.5800 98.580000 0.910685
Fomitiporia mediterranea v1.0 5.3300 5.330000 0.073938
Blattabacterium sp. (Mastotermes darwiniensis) str. MADAR 100.0000 100.000000 1.000000
Fomitopsis pinicola v1.0 62.5800 62.580000 0.638508
Bordetella pertussis CS 100.0000 100.000000 1.000000
Gloeophyllum trabeum v1.0 97.5000 97.500000 0.898328
Hansenula polymorpha v2.0 4.1100 4.110000 0.058742
Borrelia afzelii PKo 99.8700 99.870000 0.956117
Pseudomonas aeruginosa PA1 100.0000 100.000000 1.000000
Pichia membranifaciens v1.0 0.0400 0.040000 0.001507
Punctularia strigosozonata v1.0 18.6600 18.660000 0.228185
Candidatus Nitrosopumilus sp. AR2 100.0000 100.000000 1.000000
Borrelia bissettii DN127 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus VC40 100.0000 100.000000 1.000000
Natronobacterium gregoryi SP2 100.0000 100.000000 1.000000
Streptococcus pneumoniae SPN994039 100.0000 100.000000 1.000000
Borrelia burgdorferi JD1 100.0000 100.000000 1.000000
Lactobacillus casei W56 100.0000 100.000000 1.000000
Borrelia burgdorferi N40 100.0000 100.000000 1.000000
Mycobacterium liflandii 128FXT 100.0000 100.000000 1.000000
Synechococcus sp. PCC 6312 100.0000 100.000000 1.000000
Cronobacter sakazakii SP291 100.0000 100.000000 1.000000
Aspergillus brasiliensis v1.0 3.5100 3.510000 0.050845
Heterobasidion annosum 61.6900 61.690000 0.631292
Phaeobacter gallaeciensis 2.10 100.0000 100.000000 1.000000
Rhodotorula graminis WP1 v1.0 0.1000 0.100000 0.002621
Microsporum canis CBS 113480 99.8800 99.880000 0.957646
Borrelia crocidurae str. Achema 100.0000 100.000000 1.000000
Plasmodium falciparum Dd2 50.0500 50.050000 0.533243
Septoria musiva v1.0 99.2500 99.250000 0.921608
Pseudomonas protegens Pf-5 99.9600 99.960000 0.975192
Setosphaeria turcica v1.0 99.9100 99.910000 0.961774
Borrelia garinii BgVir 100.0000 100.000000 1.000000
Streptococcus dysgalactiae subsp. equisimilis ATCC 12394 100.0000 100.000000 1.000000
Plasmodium falciparum HB3 72.6800 72.680000 0.716737
Stereum hirsutum FP-91666 SS1 v1.0 12.3000 12.300000 0.156523
Trametes versicolor v1.0 7.9200 7.920000 0.105116
Staphylococcus aureus subsp. aureus SA40 100.0000 100.000000 1.000000
Lactobacillus plantarum subsp. plantarum P-8 100.0000 100.000000 1.000000
Melampsora laricis-populina 93.4900 93.490000 0.867546
Brachyspira intermedia PWS/A 100.0000 100.000000 1.000000
Hydra vulgaris 9.1400 9.140000 0.119786
Wallemia sebi v1.0 99.6400 99.640000 0.936435
Salmonella bongori N268-08 100.0000 100.000000 1.000000
Wolfiporia cocos MD-104 SS10 v1.0 0.5100 0.510000 0.009919
Bradyrhizobium japonicum USDA 6 100.0000 100.000000 1.000000
Acyrthosiphon pisum 47.0800 47.080000 0.507337
Pseudomonas syringae pv. phaseolicola 1448A 99.6400 99.640000 0.936435
Candidatus Carsonella ruddii HC isolate Thao2000 100.0000 100.000000 1.000000
Penicillium chrysogenum v1.0 19.1400 19.140000 0.233529
Bacillus subtilis subsp. subtilis str. BAB-1 100.0000 100.000000 1.000000
Ferroplasma acidarmanus fer1 100.0000 100.000000 1.000000
Brugia malayi WS250 35.4200 35.420000 0.400075
Chlamydia trachomatis A/HAR-13 99.9900 99.990000 0.992240
Shewanella baltica BA175 100.0000 100.000000 1.000000
Rickettsia bellii RML369-C 99.6700 99.670000 0.937724
Bradyrhizobium sp. S23321 100.0000 100.000000 1.000000
Cyanobacterium stanieri PCC 7202 100.0000 100.000000 1.000000
Cupriavidus metallidurans CH34 99.7600 99.760000 0.944521
Brucella abortus A13334 100.0000 100.000000 1.000000
Saccharomyces cerevisiae RM11-1a 99.9700 99.970000 0.979928
Brucella canis HSK A52141 100.0000 100.000000 1.000000
Carica papaya 2.7800 2.780000 0.041329
Brucella melitensis M28 100.0000 100.000000 1.000000
Amborella trichopoda 22 99.5900 99.590000 0.933555
Pisolithus microcarpus 441 v1.0 0.3300 0.330000 0.007041
Candidatus Kinetoplastibacterium crithidii (ex Angomonas deanei ATCC 30255) 100.0000 100.000000 1.000000
Streptomyces sp. SirexAA-E 100.0000 100.000000 1.000000
Brucella melitensis M5-90 100.0000 100.000000 1.000000
Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 95.4400 95.440000 0.881740
Chlamydia trachomatis L2b/UCH-2 100.0000 100.000000 1.000000
Brucella melitensis NI 100.0000 100.000000 1.000000
Brucella pinnipedialis B2/94 100.0000 100.000000 1.000000
Brucella suis 1330 100.0000 100.000000 1.000000
Mycobacterium tuberculosis str. Haarlem 100.0000 100.000000 1.000000
Chlamydia trachomatis L2b/Ams5 100.0000 100.000000 1.000000
Chlamydia trachomatis E/SotonE4 100.0000 100.000000 1.000000
Brucella suis VBI22 100.0000 100.000000 1.000000
Borrelia burgdorferi CA382 100.0000 100.000000 1.000000
Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) 100.0000 100.000000 1.000000
Streptococcus pneumoniae SPNA45 99.9700 99.970000 0.979928
Sebacina vermifera MAFF 305830 v1.0 0.0800 0.080000 0.002280
Phytophthora ramorum 1.1 98.4500 98.450000 0.908670
Burkholderia sp. RPE64 100.0000 100.000000 1.000000
Rhodospirillum rubrum ATCC 11170 99.7400 99.740000 0.942379
Calothrix sp. PCC 7507 100.0000 100.000000 1.000000
Rickettsia conorii str. Malish 7 98.5600 98.560000 0.910191
Buchnera aphidicola (Cinara tujafilina) 99.7200 99.720000 0.941520
Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) 100.0000 100.000000 1.000000
Rhodopseudomonas palustris CGA009 99.3300 99.330000 0.923578
Acidovorax sp. KKS102 100.0000 100.000000 1.000000
Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) 100.0000 100.000000 1.000000
Trichoderma reesei 1.2 99.3000 99.300000 0.922748
Enterobacter cloacae subsp. cloacae NCTC 9394 100.0000 100.000000 1.000000
Rickettsia felis URRWXCal2 97.8300 97.830000 0.902261
Rhodopseudomonas palustris BisB18 99.5300 99.530000 0.930795
Rhodobacter sphaeroides 2.4.1 99.7500 99.750000 0.943175
Psychrobacter arcticus 273-4 99.3000 99.300000 0.922748
Crinalium epipsammum PCC 9333 100.0000 100.000000 1.000000
Rhodopseudomonas palustris HaA2 99.6000 99.600000 0.933893
Ralstonia eutropha JMP134 99.5300 99.530000 0.930795
Cryptosporidium hominis 96.6500 96.650000 0.891343
Rattus norvegicus 76_5.0 98.0800 98.080000 0.904582
Rickettsia prowazekii str. Madrid E 99.8800 99.880000 0.957646
Trichoplax adhaerens 99.8000 99.800000 0.947980
Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) 100.0000 100.000000 1.000000
Rhodopseudomonas palustris BisB5 99.6000 99.600000 0.933893
Ralstonia solanacearum GMI1000 98.8700 98.870000 0.913894
Rickettsia typhi str. Wilmington 99.6800 99.680000 0.938062
Macaca mulatta 76_1 99.9700 99.970000 0.979928
Methanoregula formicica Methanoregula formicicum SMSP 100.0000 100.000000 1.000000
Salinibacter ruber DSM 13855 98.8100 98.810000 0.913148
Buchnera aphidicola str. Ua (Uroleucon ambrosiae) 100.0000 100.000000 1.000000
Rubrobacter xylanophilus DSM 9941 99.6200 99.620000 0.935302
Bartonella quintana RM-11 100.0000 100.000000 1.000000
Rhodoferax ferrireducens T118 99.3700 99.370000 0.924747
Rhizopus oryzae RA 99-880 99.9700 99.970000 0.979928
Rhizobium etli CFN 42 99.5100 99.510000 0.929844
Burkholderia sp. KJ006 100.0000 100.000000 1.000000
Shigella flexneri 2a str. 301 99.9900 99.990000 0.992240
Burkholderia pseudomallei 1026b 100.0000 100.000000 1.000000
Lactobacillus rhamnosus LOCK900 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus MW2 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus N315 100.0000 100.000000 1.000000
Staphylococcus epidermidis ATCC 12228 99.9800 99.980000 0.985397
Candidatus Moranella endobia PCVAL 100.0000 100.000000 1.000000
Streptococcus agalactiae 2603V/R 100.0000 100.000000 1.000000
Streptococcus agalactiae NEM316 100.0000 100.000000 1.000000
Streptococcus mutans UA159 99.9800 99.980000 0.985397
Streptococcus pyogenes MGAS315 99.8900 99.890000 0.959266
Streptococcus pyogenes SSI-1 99.8100 99.810000 0.949783
Bartonella australis Aust/NH1 100.0000 100.000000 1.000000
Streptomyces avermitilis MA-4680 99.5400 99.540000 0.931316
Natrinema pellirubrum DSM 15624 100.0000 100.000000 1.000000
Burkholderia sp. YI23 100.0000 100.000000 1.000000
Salmonella bongori NCTC 12419 100.0000 100.000000 1.000000
Corynebacterium glutamicum ATCC 13032 99.8000 99.800000 0.947980
Alteromonas macleodii AltDE1 100.0000 100.000000 1.000000
Serratia liquefaciens ATCC 27592 100.0000 100.000000 1.000000
Streptococcus agalactiae 09mas018883 100.0000 100.000000 1.000000
Mycobacterium indicus pranii MTCC 9506 100.0000 100.000000 1.000000
Caldicellulosiruptor lactoaceticus 6A 100.0000 100.000000 1.000000
Methanosarcina mazei Tuc01 100.0000 100.000000 1.000000
Caldilinea aerophila DSM 14535 = NBRC 104270 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus Mu50 100.0000 100.000000 1.000000
Symbiobacterium thermophilum IAM 14863 99.5200 99.520000 0.930090
Bacillus amyloliquefaciens subsp. plantarum UCMB5033 100.0000 100.000000 1.000000
Saccharomyces cerevisiae SGD 99.2300 99.230000 0.920749
Streptococcus thermophilus LMG 18311 97.0500 97.050000 0.894542
Campylobacter jejuni subsp. jejuni 00-2538 100.0000 100.000000 1.000000
Fibrella aestuarina 100.0000 100.000000 1.000000
Streptomyces coelicolor A3(2) 99.8400 99.840000 0.952813
Ruegeria pomeroyi DSS-3 99.4900 99.490000 0.928619
Listeria monocytogenes La111 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Typhi str. CT18 100.0000 100.000000 1.000000
Caldisericum exile AZM16c01 100.0000 100.000000 1.000000
Phytophthora sojae 1.1 32.0600 32.060000 0.367466
Campylobacter jejuni subsp. jejuni IA3902 100.0000 100.000000 1.000000
Staphylococcus aureus RF122 100.0000 100.000000 1.000000
Campylobacter jejuni subsp. jejuni M1 100.0000 100.000000 1.000000
Campylobacter jejuni subsp. jejuni S3 100.0000 100.000000 1.000000
Shewanella oneidensis MR-1 99.1100 99.110000 0.917975
Chlamydia psittaci MN 100.0000 100.000000 1.000000
Sinorhizobium meliloti 1021 99.9600 99.960000 0.975192
Synechococcus elongatus PCC 7942 99.2100 99.210000 0.920439
Synechococcus sp. CC9605 99.0400 99.040000 0.916617
Streptococcus pyogenes MGAS10394 99.8100 99.810000 0.949783
Synechocystis sp. PCC 6803 substr. PCC-P 100.0000 100.000000 1.000000
Shigella boydii Sb227 100.0000 100.000000 1.000000
Candidatus Arthromitus sp. SFB-mouse-Japan 100.0000 100.000000 1.000000
Streptococcus pneumoniae TIGR4 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus TCH60 100.0000 100.000000 1.000000
Sulfolobus solfataricus P2 99.2400 99.240000 0.921270
Streptococcus pneumoniae R6 99.9700 99.970000 0.979928
Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 100.0000 100.000000 1.000000
Sulfolobus tokodaii str. 7 80.8300 80.830000 0.777068
Streptococcus pyogenes MGAS8232 99.9500 99.950000 0.971280
Synechococcus sp. WH 8102 99.2500 99.250000 0.921608
Thermococcus sp. AM4 100.0000 100.000000 1.000000
Synechococcus sp. CC9902 98.9200 98.920000 0.914576
Thermus thermophilus HB27 99.4600 99.460000 0.927513
Musa acuminata 22 99.9700 99.970000 0.979928
Ehrlichia ruminantium str. Welgevonden 97.8200 97.820000 0.901922
Candidatus Arthromitus sp. SFB-mouse-Yit 100.0000 100.000000 1.000000
Candidatus Arthromitus sp. SFB-rat-Yit 100.0000 100.000000 1.000000
Streptococcus equi subsp. zooepidemicus ATCC 35246 100.0000 100.000000 1.000000
Candida tropicalis MYA-3404 99.8900 99.890000 0.959266
Pyrenophora tritici-repentis 99.9400 99.940000 0.967919
Histoplasma capsulatum G186AR 99.9600 99.960000 0.975192
Histoplasma capsulatum H143 99.9100 99.910000 0.961774
Tropheryma whipplei TW08/27 98.5300 98.530000 0.909910
Histoplasma capsulatum H88 99.9900 99.990000 0.992240
Dehalococcoides mccartyi BTF08 100.0000 100.000000 1.000000
Streptococcus pneumoniae SPN994038 100.0000 100.000000 1.000000
Candidatus Chloracidobacterium thermophilum B 100.0000 100.000000 1.000000
Candidatus Methylomirabilis oxyfera 100.0000 100.000000 1.000000
Candidatus Midichloria mitochondrii IricVA 99.9200 99.920000 0.963395
Candidatus Moranella endobia PCIT 100.0000 100.000000 1.000000
Bartonella vinsonii subsp. berkhoffii str. Winnie 100.0000 100.000000 1.000000
Francisella tularensis subsp. holarctica F92 100.0000 100.000000 1.000000
Actinoplanes friuliensis DSM 7358 100.0000 100.000000 1.000000
Candidatus Rickettsia amblyommii str. GAT-30V 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus HO 5096 0412 100.0000 100.000000 1.000000
Candidatus Tremblaya princeps PCIT 100.0000 100.000000 1.000000
Candidatus Uzinura diaspidicola str. ASNER 100.0000 100.000000 1.000000
Thermoplasma acidophilum DSM 1728 86.0300 86.030000 0.814204
Trypanosoma brucei gambiense v4.1 99.1600 99.160000 0.919024
Thiomicrospira crunogena XCL-2 99.0900 99.090000 0.917574
Treponema denticola ATCC 35405 99.9900 99.990000 0.992240
Mannheimia succiniciproducens MBEL55E 97.7700 97.770000 0.901421
Salmonella enterica subsp. enterica serovar Typhi str. Ty21a 100.0000 100.000000 1.000000
Candidatus Liberibacter americanus str. Sao Paulo 100.0000 100.000000 1.000000
Clostridium tetani E88 97.5600 97.560000 0.899077
Thermobifida fusca YX 99.8100 99.810000 0.949783
Ovis aries 76_3.1 99.9900 99.990000 0.992240
Salmonella enterica subsp. enterica serovar Bareilly str. CFSAN000189 100.0000 100.000000 1.000000
Pythium aphanidermatum DAOM BR444 22 0.7300 0.730000 0.013289
Streptococcus pyogenes MGAS10750 99.9000 99.900000 0.960154
Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1 100.0000 100.000000 1.000000
Thermosynechococcus elongatus BP-1 98.1800 98.180000 0.905584
Desulfovibrio hydrothermalis AM13 = DSM 14728 100.0000 100.000000 1.000000
Candidatus Phytoplasma australiense Strawberry lethal yellows phytoplasma (CPA) str. NZSb11 100.0000 100.000000 1.000000
Tribolium castaneum 3.0 99.1200 99.120000 0.918313
Thermococcus kodakarensis KOD1 99.8700 99.870000 0.956117
Spiroplasma diminutum CUAS-1 100.0000 100.000000 1.000000
Candidatus Tremblaya princeps PCVAL 100.0000 100.000000 1.000000
Thermotoga maritima MSB8 99.2800 99.280000 0.922255
Tetraodon nigroviridis 76_8 100.0000 100.000000 1.000000
Takifugu rubripes 76_4 99.9900 99.990000 0.992240
Thermosynechococcus sp. NK55 100.0000 100.000000 1.000000
Treponema pallidum subsp. pallidum str. Nichols 99.9300 99.930000 0.965199
Capnocytophaga canimorsus Cc5 100.0000 100.000000 1.000000
Thermus thermophilus HB8 99.7600 99.760000 0.944521
Streptococcus pyogenes MGAS10270 99.9400 99.940000 0.967919
[Cellvibrio] gilvus ATCC 13127 100.0000 100.000000 1.000000
Thermoanaerobacter tengcongensis MB4 99.5400 99.540000 0.931316
Streptomyces rapamycinicus NRRL 5491 5.6200 5.620000 0.077490
Strongylocentrotus purpuratus v3.1 98.6800 98.680000 0.911776
Thermoplasma volcanium GSS1 73.0100 73.010000 0.719538
Tropheryma whipplei str. Twist 96.9300 96.930000 0.893592
Trichomonas vaginalis 60.8300 60.830000 0.624181
Cochliobolus miyabeanus ATCC 44560 v1.0 99.9100 99.910000 0.961774
Tupaia belangeri 76 16.0500 16.050000 0.198877
Chlamydia trachomatis A2497 100.0000 100.000000 1.000000
Candidatus Portiera aleyrodidarum BT-B-HRs whitefly B from Isarael 100.0000 100.000000 1.000000
Chlamydia trachomatis D-EC 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus 11819-97 100.0000 100.000000 1.000000
Chlamydia trachomatis D-LC 100.0000 100.000000 1.000000
Lawsonia intracellularis N343 100.0000 100.000000 1.000000
Chlamydia trachomatis E/11023 100.0000 100.000000 1.000000
[Clostridium] stercorarium Clostridiu subsp. stercorarium DSM 8532 100.0000 100.000000 1.000000
Streptomyces violaceusniger Tu 4113 100.0000 100.000000 1.000000
Salmonella enterica serovar Bovismorbificans genomics 100.0000 100.000000 1.000000
Candidatus Pelagibacter ubique HTCC1062 98.6900 98.690000 0.911931
Cryptosporidium muris 99.8200 99.820000 0.951221
Amycolatopsis mediterranei RB 100.0000 100.000000 1.000000
Pseudomonas syringae pv. syringae B728a 99.9200 99.920000 0.963395
Toxoplasma gondii ME49 63.4500 63.450000 0.645619
Toxoplasma gondii GT1 55.4200 55.420000 0.579357
Listeria monocytogenes serotype 7 str. SLCC2482 100.0000 100.000000 1.000000
Mucor circinelloides 1.9900 1.990000 0.030842
Ustilago maydis 99.3200 99.320000 0.923332
Neospora caninum 97.6600 97.660000 0.900080
Chlamydia trachomatis E/150 100.0000 100.000000 1.000000
Aeropyrum camini SY1 = JCM 12091 100.0000 100.000000 1.000000
Uncinocarpus reesii 1704 99.5700 99.570000 0.932788
Dekkera bruxellensis CBS 2499 v2.0 2.4900 2.490000 0.037514
Tursiops truncatus 76_1 28.2600 28.260000 0.329466
Ureaplasma urealyticum serovar 10 str. ATCC 33699 100.0000 100.000000 1.000000
Toxoplasma gondii VEG 60.2100 60.210000 0.619138
Sulfuricella denitrificans skB26 100.0000 100.000000 1.000000
Chlamydia trachomatis E/SW3 100.0000 100.000000 1.000000
Chlamydia trachomatis F/SW4 100.0000 100.000000 1.000000
Listeria monocytogenes J1816 100.0000 100.000000 1.000000
Chlamydia trachomatis F/SW5 100.0000 100.000000 1.000000
Chlamydia trachomatis G/11074 100.0000 100.000000 1.000000
Trypanosoma cruzi strain CL Brener 86.4700 86.470000 0.817378
Rickettsia slovaca 13-B 100.0000 100.000000 1.000000
Carnobacterium maltaromaticum LMA28 100.0000 100.000000 1.000000
Streptomyces sp. PAMC26508 100.0000 100.000000 1.000000
Brachyspira pilosicoli P43/6/78 100.0000 100.000000 1.000000
Corynebacterium halotolerans YIM 70093 = DSM 44683 100.0000 100.000000 1.000000
Chlamydia trachomatis G/11222 100.0000 100.000000 1.000000
Wigglesworthia glossinidia endosymbiont of Glossina morsitans morsitans (Yale colony) 100.0000 100.000000 1.000000
Bradyrhizobium oligotrophicum S58 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Typhimurium str. T000240 100.0000 100.000000 1.000000
Chlamydia trachomatis G/9301 100.0000 100.000000 1.000000
Poecilia formosa 76 10.0300 10.030000 0.130252
Chlamydia trachomatis G/9768 100.0000 100.000000 1.000000
Chlamydia trachomatis L2c 100.0000 100.000000 1.000000
Chlamydia trachomatis Sweden2 100.0000 100.000000 1.000000
Aspergillus acidus v1.0 20.3000 20.300000 0.246196
Anabaena variabilis ATCC 29413 99.6000 99.600000 0.933893
Mycobacterium smegmatis str. MC2 155 99.6800 99.680000 0.938062
Vibrio vulnificus YJ016 98.4700 98.470000 0.909163
Vibrio cholerae O1 biovar El Tor str. N16961 100.0000 100.000000 1.000000
Verticillium dahliae VdLs.17 99.9900 99.990000 0.992240
Verticillium albo-atrum VaMs.102 99.9900 99.990000 0.992240
Vibrio fischeri ES114 99.5000 99.500000 0.929140
Chlorella vulgaris 41.9400 41.940000 0.461174
Chromobacterium violaceum ATCC 12472 99.3300 99.330000 0.923578
Chlamydophila pneumoniae LPCoLN 100.0000 100.000000 1.000000
Burkholderia multivorans ATCC 17616 100.0000 100.000000 1.000000
Thermus sp. CCB_US3_UF1 100.0000 100.000000 1.000000
Procavia capensis 76_1 17.1300 17.130000 0.211244
Volvox carteri f. nagariensis 91.4300 91.430000 0.852668
Erysipelothrix rhusiopathiae SY1027 74.3800 74.380000 0.729956
Vibrio parahaemolyticus RIMD 2210633 99.9900 99.990000 0.992240
Pteropus vampyrus 76_1 28.7200 28.720000 0.334250
Vitis vinifera 47.5300 47.530000 0.511360
Vicugna pacos 76_1 22.9500 22.950000 0.274558
Xanthomonas citri subsp. citri Aw12879 100.0000 100.000000 1.000000
Vibrio vulnificus CMCP6 99.7100 99.710000 0.940633
Vanderwaltozyma polyspora DSM 70294 99.9800 99.980000 0.985397
Plasmodium vivax SaI-1 7.0 99.1900 99.190000 0.919580
Zymomonas mobilis subsp. mobilis ATCC 10988 99.9800 99.980000 0.985397
Chlamydia psittaci 01DC11 100.0000 100.000000 1.000000
Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74 100.0000 100.000000 1.000000
Chlamydia psittaci 02DC15 100.0000 100.000000 1.000000
Chlamydia psittaci 08DC60 100.0000 100.000000 1.000000
Oikopleura dioica 99.5400 99.540000 0.931316
Chlamydophila psittaci 6BC 100.0000 100.000000 1.000000
Chlamydia psittaci C19/98 100.0000 100.000000 1.000000
[Eubacterium] cylindroides [Eubacterium] cylindroides T2-87 100.0000 100.000000 1.000000
Anopheles gambiae VectorBase AgamP3.6 95.8800 95.880000 0.885305
Fragaria vesca 2.8100 2.810000 0.041878
Psychrobacter sp. G 100.0000 100.000000 1.000000
Chlamydophila psittaci RD1 100.0000 100.000000 1.000000
Vibrio cholerae O1 str. 2010EL-1786 100.0000 100.000000 1.000000
Pseudomonas sp. UW4 100.0000 100.000000 1.000000
Chlamydia psittaci 01DC12 100.0000 100.000000 1.000000
Clostridium acetobutylicum DSM 1731 100.0000 100.000000 1.000000
Clostridium acetobutylicum EA 2018 100.0000 100.000000 1.000000
Serratia sp. ATCC 39006 99.8800 99.880000 0.957646
Staphylococcus aureus subsp. aureus JKD6159 100.0000 100.000000 1.000000
Thermoanaerobacter wiegelii Rt8.B1 100.0000 100.000000 1.000000
Mycoplasma gallisepticum NC96_1596-4-2P 100.0000 100.000000 1.000000
Clostridium sp. BNL1100 100.0000 100.000000 1.000000
Corynebacterium callunae DSM 20147 100.0000 100.000000 1.000000
Clostridium tetani genome 12124569 100.0000 100.000000 1.000000
Sulfolobus islandicus REY15A 100.0000 100.000000 1.000000
Streptococcus pneumoniae OXC141 99.9900 99.990000 0.992240
Morganella morganii subsp. morganii KT 100.0000 100.000000 1.000000
Clostridium botulinum F str. 230613 100.0000 100.000000 1.000000
Triticum urartu 22 100.0000 100.000000 1.000000
Staphylococcus aureus 08BA02176 100.0000 100.000000 1.000000
Fragilariopsis cylindrus 0.1800 0.180000 0.004350
Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis 97.7300 97.730000 0.900892
Cochliobolus heterostrophus 80.3200 80.320000 0.773298
Emiliania huxleyi CCMP1516 97.2300 97.230000 0.896057
Phaeodactylum tricornutum CCAP 1055/1 97.7600 97.760000 0.901174
Candida tanzawaensis NRRL Y-17324 v1.0 0.0300 0.030000 0.001107
Listeria monocytogenes ATCC 19117 100.0000 100.000000 1.000000
Thalassiosira pseudonana CCMP1335 97.0500 97.050000 0.894542
Nitrobacter winogradskyi Nb-255 99.3500 99.350000 0.924254
Caenorhabditis japonica 18.5800 18.580000 0.227232
Candidatus Carsonella ruddii HT isolate Thao2000 100.0000 100.000000 1.000000
Wolbachia endosymbiont strain TRS of Brugia malayi 97.6700 97.670000 0.900327
Clostridium botulinum H04402 065 100.0000 100.000000 1.000000
Caenorhabditis brenneri 98.7100 98.710000 0.912149
Wolbachia endosymbiont of Drosophila melanogaster 99.8400 99.840000 0.952813
Bifidobacterium thermophilum RBL67 100.0000 100.000000 1.000000
Pristionchus pacificus 97.3100 97.310000 0.896751
Clostridium clariflavum DSM 19732 100.0000 100.000000 1.000000
Caenorhabditis remanei 99.5800 99.580000 0.933034
Pseudomonas denitrificans ATCC 13867 100.0000 100.000000 1.000000
Wolinella succinogenes DSM 1740 98.9900 98.990000 0.915568
Trichoderma atroviride 63.7500 63.750000 0.648059
Bordetella bronchiseptica MO149 100.0000 100.000000 1.000000
Clostridium difficile BI1 99.9000 99.900000 0.960154
Capsaspora owczarzaki ATCC 30864 61.4900 61.490000 0.629614
Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 100.0000 100.000000 1.000000
Staphylococcus aureus subsp. aureus 6850 100.0000 100.000000 1.000000
Streptococcus thermophilus CNRZ1066 96.7500 96.750000 0.892166
Streptococcus pyogenes M1 GAS 99.6900 99.690000 0.938858
Synechococcus elongatus PCC 6301 99.0800 99.080000 0.917328
Bacillus clausii KSM-K16 99.5400 99.540000 0.931316
Bacillus cereus E33L 99.9800 99.980000 0.985397
Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 100.0000 100.000000 1.000000
Conidiobolus coronatus NRRL28638 v1.0 0.0000 0.000000 0.000000
Legionella pneumophila subsp. pneumophila str. Philadelphia 1 99.9000 99.900000 0.960154
Staphylococcus aureus subsp. aureus COL 100.0000 100.000000 1.000000
Clostridium sp. SY8519 99.9600 99.960000 0.975192
Mycoplasma hyopneumoniae 232 99.1900 99.190000 0.919580
Corynebacterium maris DSM 45190 100.0000 100.000000 1.000000
Vibrio furnissii NCTC 11218 100.0000 100.000000 1.000000
Leifsonia xyli subsp. cynodontis DSM 46306 100.0000 100.000000 1.000000
Thermodesulfatator indicus DSM 15286 100.0000 100.000000 1.000000
Sulfolobus acidocaldarius SUSAZ 100.0000 100.000000 1.000000
Sinorhizobium meliloti SM11 100.0000 100.000000 1.000000
Streptococcus thermophilus MN-ZLW-002 100.0000 100.000000 1.000000
Wolbachia endosymbiont of Drosophila simulans wHa 100.0000 100.000000 1.000000
Clostridium thermocellum DSM 1313 100.0000 100.000000 1.000000
Bifidobacterium animalis subsp. lactis ATCC 27673 100.0000 100.000000 1.000000
Collimonas fungivorans Ter331 100.0000 100.000000 1.000000
Xanthomonas campestris pv. campestris str. 8004 97.7600 97.760000 0.901174
Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 100.0000 100.000000 1.000000
Xanthomonas axonopodis pv. citri str. 306 99.2000 99.200000 0.920193
Xanthomonas campestris pv. campestris str. ATCC 33913 97.8200 97.820000 0.901922
Corallococcus coralloides DSM 2259 100.0000 100.000000 1.000000
Xylella fastidiosa 9a5c 97.6700 97.670000 0.900327
Mycoplasma hyorhinis DBS 1050 100.0000 100.000000 1.000000
Corynebacterium diphtheriae 241 100.0000 100.000000 1.000000
Xenopus laevis 95.0400 95.040000 0.878609
Xenopus tropicalis 76_4.2 99.7000 99.700000 0.939837
Cyanobacterium aponinum PCC 10605 100.0000 100.000000 1.000000
Xanthomonas oryzae pv. oryzae KACC 10331 96.0400 96.040000 0.886516
Pan troglodytes 76_2.1.4 99.9200 99.920000 0.963395
Salmonella enterica subsp. enterica serovar Typhimurium str. U288 100.0000 100.000000 1.000000
Treponema pallidum subsp. pertenue str. CDC2 100.0000 100.000000 1.000000
Corynebacterium diphtheriae 31A 100.0000 100.000000 1.000000
Sorex araneus 76_1 20.6900 20.690000 0.250429
Corynebacterium diphtheriae BH8 100.0000 100.000000 1.000000
Escherichia coli E. coli PMV-1 100.0000 100.000000 1.000000
Saccharomyces cerevisiae 76 99.8200 99.820000 0.951221
Xylella fastidiosa Temecula1 99.1000 99.100000 0.917729
Xanthomonas campestris pv. vesicatoria str. 85-10 99.7100 99.710000 0.940633
Xanthomonas oryzae pv. oryzae MAFF 311018 99.9000 99.900000 0.960154
Lactobacillus rhamnosus GG 100.0000 100.000000 1.000000
Saccharomyces bayanus MIT 4.5400 4.540000 0.064195
Complete genome sequence of Methanobacterium sp. Mb1 100.0000 100.000000 1.000000
Kinetoplastibacterium blastocrithidii Candidatus TCC012E 100.0000 100.000000 1.000000
Lachancea kluyveri 1.9500 1.950000 0.030260
Corynebacterium diphtheriae C7 (beta) 100.0000 100.000000 1.000000
Saccharomyces mikatae MIT 8.2300 8.230000 0.109015
Saccharomyces paradoxus MIT 14.3100 14.310000 0.179356
Corynebacterium diphtheriae CDCE 8392 100.0000 100.000000 1.000000
Mycobacterium tuberculosis H37Rv 99.9900 99.990000 0.992240
Mycoplasma gallisepticum VA94_7994-1-7P 100.0000 100.000000 1.000000
Corynebacterium diphtheriae HC01 100.0000 100.000000 1.000000
Candidatus Phytoplasma solani tobfin_28409 100.0000 100.000000 1.000000
Corynebacterium diphtheriae HC02 100.0000 100.000000 1.000000
Lactobacillus helveticus CNRZ32 100.0000 100.000000 1.000000
Cyanidioschyzon merolae 97.5000 97.500000 0.898328
Mycobacterium sp. MCS 99.8700 99.870000 0.956117
Mycoplasma synoviae 53 57.5100 57.510000 0.596966
Dictyostelium purpureum 99.5300 99.530000 0.930795
Yersinia pestis biovar Microtus str. 91001 99.9400 99.940000 0.967919
Glycine max v109 54.4600 54.460000 0.571214
Cryphonectria parasitica 1.7800 1.780000 0.027989
Mycoplasma capricolum subsp. capricolum ATCC 27343 99.7000 99.700000 0.939837
Saccharomyces cerevisiae YJM789 100.0000 100.000000 1.000000
Yersinia pestis KIM10+ 99.9500 99.950000 0.971280
Rhodnius prolixus 22 99.9300 99.930000 0.965199
Yarrowia lipolytica CLIB122 99.7600 99.760000 0.944521
Mycosphaerella fijiensis CIRAD86 53.6300 53.630000 0.564108
Eubacterium siraeum 100.0000 100.000000 1.000000
Yersinia pestis Nepal516 100.0000 100.000000 1.000000
Vibrio anguillarum Listonella anguillarum M3 100.0000 100.000000 1.000000
Mycosphaerella graminicola IPO323 44.2600 44.260000 0.482141
Yersinia pestis CO92 100.0000 100.000000 1.000000
Pandoraea sp. RB-44 100.0000 100.000000 1.000000
Corynebacterium diphtheriae HC03 100.0000 100.000000 1.000000
Yersinia pseudotuberculosis IP 32953 99.9900 99.990000 0.992240
Yersinia pestis Antiqua 100.0000 100.000000 1.000000
Syntrophus aciditrophicus SB 99.1000 99.100000 0.917729
Sporobolomyces roseus IAM 13481 0.1600 0.160000 0.003918
Kluyveromyces thermotolerans CBS 6340 99.9400 99.940000 0.967919
Phytophthora capsici 2.8700 2.870000 0.042701
Zygosaccharomyces rouxii 99.9800 99.980000 0.985397
Nostoc sp. PCC 7107 100.0000 100.000000 1.000000
Corynebacterium diphtheriae HC04 100.0000 100.000000 1.000000
Corynebacterium diphtheriae INCA 402 100.0000 100.000000 1.000000
Corynebacterium diphtheriae PW8 100.0000 100.000000 1.000000
Corynebacterium diphtheriae VA01 100.0000 100.000000 1.000000
Amphimedon queenslandica 91.3600 91.360000 0.852115
Solanum lycopersicum v.2.3 99.8500 99.850000 0.953608
Theobroma cacao Matina 1-6 v0.9 2.5600 2.560000 0.038461
Sulfurospirillum barnesii SES-3 100.0000 100.000000 1.000000
Xylella fastidiosa subsp. fastidiosa GB514 99.9900 99.990000 0.992240
Spiroplasma syrphidicola EA-1 100.0000 100.000000 1.000000
Corynebacterium glutamicum ATCC 13032 99.8000 99.800000 0.947980
Pythium iwayamai DAOM BR242034 22 0.2000 0.200000 0.004874
Corynebacterium pseudotuberculosis 1002 100.0000 100.000000 1.000000
Streptococcus suis ST1 100.0000 100.000000 1.000000
Corynebacterium pseudotuberculosis 1/06-A 100.0000 100.000000 1.000000
Chlamydia trachomatis A/363 100.0000 100.000000 1.000000
Sulfolobus acidocaldarius DSM 639 99.6500 99.650000 0.936956
Atta cephalotes v1.1 98.1100 98.110000 0.904956
Schizophyllum commune 98.6100 98.610000 0.911058
Camponotus floridanus v3.3 87.8100 87.810000 0.826988
Zea mays subsp. mays 56.9100 56.910000 0.591975
Taeniopygia guttata 76_3.2.4 100.0000 100.000000 1.000000
Corynebacterium pseudotuberculosis 258 100.0000 100.000000 1.000000
Harpegnathos saltator v3.3 82.2400 82.240000 0.787292
Staphylococcus haemolyticus JCSC1435 99.9500 99.950000 0.971280
Corynebacterium pseudotuberculosis 267 100.0000 100.000000 1.000000
Sinorhizobium meliloti Rm41 100.0000 100.000000 1.000000
Spizellomyces punctatus DAOM BR117 0.0300 0.030000 0.001107
Mycobacterium tuberculosis EAI5/NITR206 100.0000 100.000000 1.000000
Pogonomyrmex barbatus v1.2 8.0900 8.090000 0.107288
Wickerhamomyces anomalus 0.2500 0.250000 0.005862
Linepithema humile v1.1 6.0500 6.050000 0.082790
Zymomonas mobilis subsp. mobilis ZM4 99.7800 99.780000 0.946204
Aspergillus niger 22 99.1900 99.190000 0.919580
Chlamydia trachomatis L1/224 100.0000 100.000000 1.000000
Solenopsis invicta v.2.2.3 85.9700 85.970000 0.813704
Streptococcus pyogenes MGAS5005 99.7500 99.750000 0.943175
Thermacetogenium phaeum DSM 12270 100.0000 100.000000 1.000000
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 98.8400 98.840000 0.913521
Cochliobolus victoriae FI3 v1.0 99.8600 99.860000 0.954679
Streptococcus pyogenes MGAS6180 99.9300 99.930000 0.965199
Salmonella enterica The genome of subsp. enterica serovar Typhimurium str. DT2 100.0000 100.000000 1.000000
Bacteroides sp. CF50 74.3000 74.300000 0.729280
Measure Metric Normalised
 
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DOGMA is a contribution to PQI from the Bornberglab. Please cite: Elias Dohmen, Lukas P.M. Kremer, Erich Bornberg-Bauer, and Carsten Kemena (2016) DOGMA: domain-based transcriptome and proteome quality assessment. Bioinformatics doi:10.1093/bioinformatics/btw231.

PQI is a project of the Computational Genomics Group at the University of Bristol. Please cite: Zaucha, J., Stahlhacke, J., Oates, M.E., Thurlby, N., Rackham, O.J.L., Fang, H., Smithers, B. and Gough, J. (2014) A Proteome Quality Index. Env. Microbiology doi:10.1111/1462-2920.12622. (PDF)