PQI

Chlamydia psittaci MN

Taxonomy: Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia; Chlamydia psittaci

Source: http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1218354

Compared to

Chlamydia pecorum P787 • Chlamydia pecorum W73 • Chlamydia pecorum PV3056/3 • Chlamydophila pneumoniae LPCoLN • Chlamydophila pneumoniae J138 • Chlamydophila pneumoniae CWL029 • Chlamydophila pneumoniae AR39 • Chlamydia psittaci 01DC12 • Chlamydia psittaci WC • Chlamydia psittaci M56 • Chlamydia psittaci WS/RT/E30 • Chlamydia psittaci VS225 • Chlamydia psittaci GR9 • Chlamydia psittaci 84/55 • Chlamydia psittaci 08DC60 • Chlamydia psittaci 02DC15 • Chlamydia psittaci C19/98 • Chlamydia psittaci NJ1 • Chlamydia psittaci CP3 • Chlamydophila psittaci RD1 • Chlamydia psittaci Mat116 • Chlamydophila psittaci 6BC • Chlamydia trachomatis C/TW-3 • Chlamydia trachomatis L2/434/Bu(f) • Chlamydia trachomatis L2/434/Bu(i) • Chlamydia trachomatis IU888 • Chlamydia trachomatis IU824 • Chlamydia trachomatis L2b/Canada2 • Chlamydia trachomatis L2b/Canada1 • Chlamydia trachomatis L3/404/LN • Chlamydia trachomatis L2b/Ams5 • Chlamydia trachomatis L2b/Ams4 • Chlamydia trachomatis L2b/Ams3 • Chlamydia trachomatis L2b/Ams2 • Chlamydia trachomatis L2b/Ams1 • Chlamydia trachomatis L2b/795 • Chlamydia trachomatis L2b/CV204 • Chlamydia trachomatis L2b/LST • Chlamydia trachomatis L2b/UCH-2 • Chlamydia trachomatis L2b/8200/07 • Chlamydia trachomatis L2/25667R • Chlamydia trachomatis L1/224 • Chlamydia trachomatis L1/115 • Chlamydia trachomatis L1/440/LN • Chlamydia trachomatis K/SotonK1 • Chlamydia trachomatis Ia/SotonIa3 • Chlamydia trachomatis Ia/SotonIa1 • Chlamydia trachomatis G/SotonG1 • Chlamydia trachomatis F/SotonF3 • Chlamydia trachomatis F/SW5 • Chlamydia trachomatis F/SW4 • Chlamydia trachomatis E/SotonE8 • Chlamydia trachomatis E/SotonE4 • Chlamydia trachomatis E/SW3 • Chlamydia trachomatis D/SotonD6 • Chlamydia trachomatis D/SotonD5 • Chlamydia trachomatis D/SotonD1 • Chlamydia trachomatis A/5291 • Chlamydia trachomatis A/363 • Chlamydia trachomatis RC-J/971 • Chlamydia trachomatis RC-L2/55 • Chlamydia trachomatis J/6276tet1 • Chlamydia trachomatis RC-J/966 • Chlamydia trachomatis RC-J(s)/122 • Chlamydia trachomatis RC-F(s)/342 • Chlamydia trachomatis RC-L2(s)/3 • Chlamydia trachomatis RC-J/953 • Chlamydia trachomatis RC-J943 • Chlamydia trachomatis RC-Fs852 • Chlamydia trachomatis RC-L2s46 • Chlamydia trachomatis RC-F69 • Chlamydia trachomatis L2c • Chlamydia trachomatis D-LC • Chlamydia trachomatis D-EC • Chlamydia trachomatis G/9301 • Chlamydia trachomatis G/11074 • Chlamydia trachomatis G/11222 • Chlamydia trachomatis G/9768 • Chlamydia trachomatis E/150 • Chlamydia trachomatis E/11023 • Chlamydia trachomatis B/TZ1A828/OT • Chlamydia trachomatis Sweden2 • Chlamydia trachomatis E/Bour • Chlamydia trachomatis A2497 • Chlamydia trachomatis L2b/UCH-1/proctitis • Chlamydia trachomatis 434/Bu • Chlamydia trachomatis A/HAR-13 • Chlamydia trachomatis D/UW-3/CX • Waddlia chondrophila WSU 86-1044 • Simkania negevensis Z • Chlamydophila pecorum E58 • Chlamydia muridarum Nigg • Chlamydophila pneumoniae TW-183 • Chlamydophila caviae GPIC • Chlamydophila felis Fe/C-56 • Chlamydophila abortus S26/3 • Chlamydia psittaci 01DC11 • Chlamydia trachomatis B/Jali20/OT
PQI Score
User Score (1 vote)

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Proteome Quality Index Information

Scoring Method Raw Score Metric Rating
X content 0.0000 0.000000 1.000000
PubMed Publication Count 2.0000 2.000000 0.456269
Percent of Sequences covered 55.0000 0.220019 0.917536
Number of Superfamilies 407.0000 0.218580 0.929558
Average Sequence Length 337.0000 0.283941 0.886328
Average hit length 303.0000 0.305226 0.873985
Number of Families 208.0000 0.331829 0.891803
Number of Unique Architectures 456.0000 0.274662 0.911937
Percent with Assignment 61.0000 0.302220 0.879275
Percent of sequences in Uniprot 100.0000 100.000000 1.000000
DOGMA 100.0000 100.000000 1.000000
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DOGMA is a contribution to PQI from the Bornberglab. Please cite: Elias Dohmen, Lukas P.M. Kremer, Erich Bornberg-Bauer, and Carsten Kemena (2016) DOGMA: domain-based transcriptome and proteome quality assessment. Bioinformatics doi:10.1093/bioinformatics/btw231.

PQI is a project of the Computational Genomics Group at the University of Bristol. Please cite: Zaucha, J., Stahlhacke, J., Oates, M.E., Thurlby, N., Rackham, O.J.L., Fang, H., Smithers, B. and Gough, J. (2014) A Proteome Quality Index. Env. Microbiology doi:10.1111/1462-2920.12622. (PDF)