PQI

Methanoregula boonei 6A8

Taxonomy: Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula; Methanoregula boonei

Source: NCBI

Compared to

PQI Score
User Score (1 vote)

Voting

Click on the stars to rate this proteome.

Proteome Quality Index Information

Scoring Method Raw Score Metric Rating
X content 0.0000 0.000000 1.000000
PubMed Publication Count 3.0000 3.000000 0.654145
Percent of Sequences covered 62.0000 0.740291 0.691502
Number of Superfamilies 584.0000 0.202629 0.935601
Average Sequence Length 297.0000 0.126732 0.952433
Average hit length 280.0000 0.194742 0.924085
Number of Families 303.0000 0.612052 0.775173
Number of Unique Architectures 852.0000 0.183782 0.942655
Percent with Assignment 66.0000 0.424403 0.824119
Percent of sequences in Uniprot 99.7100 99.710000 0.940633
DOGMA 100.0000 100.000000 1.000000
comments powered by Disqus

DOGMA is a contribution to PQI from the Bornberglab. Please cite: Elias Dohmen, Lukas P.M. Kremer, Erich Bornberg-Bauer, and Carsten Kemena (2016) DOGMA: domain-based transcriptome and proteome quality assessment. Bioinformatics doi:10.1093/bioinformatics/btw231.

PQI is a project of the Computational Genomics Group at the University of Bristol. Please cite: Zaucha, J., Stahlhacke, J., Oates, M.E., Thurlby, N., Rackham, O.J.L., Fang, H., Smithers, B. and Gough, J. (2014) A Proteome Quality Index. Env. Microbiology doi:10.1111/1462-2920.12622. (PDF)