PQI

Eubacterium eligens ATCC 27750

Taxonomy: Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; Eubacterium eligens

Source: NCBI

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PQI Score
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Proteome Quality Index Information

Scoring Method Raw Score Metric Rating
X content 0.0000 0.000000 1.000000
PubMed Publication Count 2.0000 2.000000 0.456269
Percent of Sequences covered 58.0000 0.142795 0.947736
Number of Superfamilies 645.0000 0.628038 0.775453
Average Sequence Length 310.0000 0.088373 0.967652
Average hit length 285.0000 0.039078 0.984969
Number of Families 404.0000 0.213842 0.934662
Number of Unique Architectures 904.0000 0.010228 0.997093
Percent with Assignment 63.0000 0.015812 0.993825
Percent of sequences in Uniprot 100.0000 100.000000 1.000000
DOGMA 90.9200 90.920000 0.789850
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DOGMA is a contribution to PQI from the Bornberglab. Please cite: Elias Dohmen, Lukas P.M. Kremer, Erich Bornberg-Bauer, and Carsten Kemena (2016) DOGMA: domain-based transcriptome and proteome quality assessment. Bioinformatics doi:10.1093/bioinformatics/btw231.

PQI is a project of the Computational Genomics Group at the University of Bristol. Please cite: Zaucha, J., Stahlhacke, J., Oates, M.E., Thurlby, N., Rackham, O.J.L., Fang, H., Smithers, B. and Gough, J. (2014) A Proteome Quality Index. Env. Microbiology doi:10.1111/1462-2920.12622. (PDF)