Proteome Quality Index

A comprehensive database of quality assessed proteomes, powered by the SUPERFAMILY Database

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Name Taxonomy Proteome Quality User Voted Quality
Pseudomonas fluorescens <small>A506</small> Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas fluorescens group; Pseudomonas fluorescens 0.921318 5.000000 Download sequences
Gloeobacter kilaueensis <small>Gloeobacter sp. JS</small> Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter; Gloeobacter kilaueensis 0.914742 5.000000 Download sequences
Anabaena sp. 90 <small></small> Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Anabaena 0.912693 5.000000 Download sequences
Neisseria lactamica <small>020-06</small> Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria lactamica 0.910545 5.000000 Download sequences
Staphylococcus aureus <small>subsp. aureus N315</small> Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus 0.910215 5.000000 Download sequences
Staphylococcus aureus <small>subsp. aureus SA40</small> Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; Staphylococcus aureus 0.909976 5.000000 Download sequences
Staphylococcus aureus <small>subsp. aureus HO 5096 0412</small> Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus 0.904948 5.000000 Download sequences
Propionibacterium acidipropionici <small>ATCC 4875</small> Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Propionibacterineae; Propionibacteriaceae; Propionibacterium; Propionibacterium acidipropionici 0.904694 5.000000 Download sequences
Roseobacter litoralis <small>Och 149</small> Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter; Roseobacter litoralis 0.904301 5.000000 Download sequences
Staphylococcus aureus <small>subsp. aureus SA957</small> Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; Staphylococcus aureus 0.903711 Download sequences
Populus trichocarpa <small>v156</small> (Black Cottonwood) Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus 0.901132 Download sequences
Paenibacillus larvae <small>subsp. larvae DSM 25430</small> Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus; Paenibacillus larvae 0.900820 Download sequences
Burkholderia sp. <small>KJ006</small> Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia 0.898417 5.000000 Download sequences
Lactobacillus johnsonii <small>FI9785</small> Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus johnsonii 0.896390 5.000000 Download sequences
Eubacterium eligens <small>ATCC 27750</small> Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; Eubacterium eligens 0.895228 5.000000 Download sequences
Serratia liquefaciens <small>ATCC 27592</small> Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia; Serratia liquefaciens 0.893824 Download sequences
Staphylococcus carnosus <small>subsp. carnosus TM300</small> Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus carnosus; Staphylococcus carnosus subsp. carnosus 0.892845 Download sequences
Thermococcus barophilus <small>MP</small> Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus; Thermococcus barophilus 0.890569 5.000000 Download sequences
Pseudomonas putida <small>W619</small> Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas putida group; Pseudomonas putida 0.890457 Download sequences
Staphylococcus aureus <small>subsp. aureus M013</small> Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus 0.890123 Download sequences
Pantoea vagans <small>C9-1</small> Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea; Pantoea vagans 0.889813 Download sequences
Staphylococcus aureus <small>subsp. aureus LGA251</small> Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus; Staphylococcus aureus subsp. aureus 0.889043 Download sequences
Streptomyces collinus <small>Tu 365</small> Bacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Streptomycineae; Streptomycetaceae; Streptomyces; Streptomyces collinus 0.888327 Download sequences
Mycobacterium abscessus <small>ATCC 19977</small> Bacteria; Actinobacteria; Actinobacteria; Actinobacteridae; Actinomycetales; Corynebacterineae; Mycobacteriaceae; Mycobacterium; Mycobacterium chelonae group; Mycobacterium abscessus subgroup; Mycobacterium abscessus 0.888165 Download sequences
Klebsiella oxytoca <small>E718</small> Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella; Klebsiella oxytoca 0.886511 Download sequences
Chlamydia psittaci <small>MN</small> Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia; Chlamydia psittaci 0.886063 5.000000 Download sequences
Acetohalobium arabaticum <small>DSM 5501</small> Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium; Acetohalobium arabaticum 0.885834 5.000000 Download sequences
Enterobacter sp. R4-368 <small></small> Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter 0.885685 Download sequences
Staphylococcus aureus <small>subsp. aureus 6850</small> Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; Staphylococcus aureus 0.885597 Download sequences
Pediococcus pentosaceus <small>SL4</small> Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus pentosaceus 0.885421 Download sequences
Alteromonas macleodii <small>str. 'Ionian Sea UM4b'</small> Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas; Alteromonas macleodii 0.884261 Download sequences
Lactobacillus johnsonii <small>N6.2</small> Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus johnsonii 0.884210 5.000000 Download sequences
Pediococcus pentosaceus <small>ATCC 25745</small> Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus; Pediococcus pentosaceus 0.883290 5.000000 Download sequences
Neisseria meningitidis <small>FAM18</small> Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria meningitidis; Neisseria meningitidis serogroup C 0.881900 Download sequences
Synechococcus sp. <small>JA-3-3Ab</small> Bacteria; Cyanobacteria; Chroococcales; Synechococcus 0.881440 Download sequences
Serratia marcescens <small>WW4</small> Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia; Serratia marcescens 0.881174 Download sequences
Pseudoxanthomonas spadix <small>BD-a59</small> Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseudoxanthomonas; Pseudoxanthomonas spadix 0.880882 Download sequences
Synechococcus sp. <small>JA-2-3B'a(2-13)</small> Bacteria; Cyanobacteria; Chroococcales; Synechococcus 0.880751 Download sequences
Alcanivorax borkumensis <small>SK2</small> Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax; Alcanivorax borkumensis 0.879688 Download sequences
Clostridium ljungdahlii <small>DSM 13528</small> Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium ljungdahlii 0.879549 Download sequences
Roseobacter denitrificans <small>OCh 114</small> Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter; Roseobacter denitrificans 0.879232 Download sequences
Escherichia blattae <small>DSM 4481</small> Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; Escherichia blattae 0.878690 Download sequences
Neisseria meningitidis <small>MC58</small> Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria meningitidis; Neisseria meningitidis serogroup B 0.878644 Download sequences
Escherichia coli <small>str. K-12 substr. W3110</small> Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli K-12 0.878581 Download sequences
Erythrobacter litoralis <small>HTCC2594</small> Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter; Erythrobacter litoralis 0.877094 Download sequences
Methanoregula boonei <small>6A8</small> Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula; Methanoregula boonei 0.876395 5.000000 Download sequences
Neisseria meningitidis <small>alpha14</small> Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neisseria; Neisseria meningitidis 0.876260 Download sequences
Verticillium dahliae <small>VdLs.17 <release></small> Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Sordariomycetes incertae sedis; Phyllachorales; mitosporic Phyllachorales; Verticillium 0.875436 5.000000 Download sequences
Salmonella enterica <small>subsp. enterica serovar Paratyphi A str. AKU_12601</small> Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella; Salmonella enterica; Salmonella enterica subsp. enterica; Salmonella enterica subsp. enterica serovar Paratyphi A 0.875161 Download sequences
Haemophilus parasuis <small>SH0165</small> Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus parasuis 0.875133 Download sequences