PQI

Haemophilus influenzae F3031

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae

Source: NCBI

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Proteome Quality Index Information

Scoring Method Raw Score Metric Rating
X content 0.0000 0.000000 1.000000
PubMed Publication Count 2.0000 2.000000 0.456269
Percent of Sequences covered 65.0000 0.601984 0.755193
Number of Superfamilies 598.0000 0.830805 0.697283
Average Sequence Length 314.0000 0.636384 0.717896
Average hit length 283.0000 0.788295 0.661423
Number of Families 565.0000 0.808164 0.698166
Number of Unique Architectures 751.0000 0.773292 0.704216
Percent with Assignment 73.0000 0.639327 0.725836
Percent of sequences in Uniprot 100.0000 100.000000 1.000000
DOGMA 94.8600 94.860000 0.853429
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DOGMA is a contribution to PQI from the Bornberglab. Please cite: Elias Dohmen, Lukas P.M. Kremer, Erich Bornberg-Bauer, and Carsten Kemena (2016) DOGMA: domain-based transcriptome and proteome quality assessment. Bioinformatics doi:10.1093/bioinformatics/btw231.

PQI is a project of the Computational Genomics Group at the University of Bristol. Please cite: Zaucha, J., Stahlhacke, J., Oates, M.E., Thurlby, N., Rackham, O.J.L., Fang, H., Smithers, B. and Gough, J. (2014) A Proteome Quality Index. Env. Microbiology doi:10.1111/1462-2920.12622. (PDF)