PQI

Haemophilus influenzae F3047

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae

Source: NCBI

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Proteome Quality Index Information

Scoring Method Raw Score Metric Rating
X content 0.0000 0.000000 1.000000
PubMed Publication Count 2.0000 2.000000 0.456269
Percent of Sequences covered 65.0000 0.601984 0.755193
Number of Superfamilies 597.0000 0.861918 0.685112
Average Sequence Length 316.0000 0.760174 0.656628
Average hit length 282.0000 0.941981 0.596929
Number of Families 570.0000 0.700029 0.738526
Number of Unique Architectures 752.0000 0.758888 0.709667
Percent with Assignment 73.0000 0.639327 0.725836
Percent of sequences in Uniprot 99.9500 99.950000 0.971280
DOGMA 93.8400 93.840000 0.836855
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DOGMA is a contribution to PQI from the Bornberglab. Please cite: Elias Dohmen, Lukas P.M. Kremer, Erich Bornberg-Bauer, and Carsten Kemena (2016) DOGMA: domain-based transcriptome and proteome quality assessment. Bioinformatics doi:10.1093/bioinformatics/btw231.

PQI is a project of the Computational Genomics Group at the University of Bristol. Please cite: Zaucha, J., Stahlhacke, J., Oates, M.E., Thurlby, N., Rackham, O.J.L., Fang, H., Smithers, B. and Gough, J. (2014) A Proteome Quality Index. Env. Microbiology doi:10.1111/1462-2920.12622. (PDF)