PQI

Haemophilus influenzae Rd KW20

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae

Source: NCBI

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Proteome Quality Index Information

Scoring Method Raw Score Metric Rating
X content 0.0093 0.009264 0.738997
PubMed Publication Count 7.0000 7.000000 0.783841
Percent of Sequences covered 71.0000 1.892718 0.279975
Number of Superfamilies 599.0000 0.791301 0.711200
Average Sequence Length 316.0000 0.773930 0.649860
Average hit length 289.0000 0.136273 0.945475
Number of Families 595.0000 0.153959 0.952975
Number of Unique Architectures 738.0000 0.951608 0.635668
Percent with Assignment 78.0000 1.810401 0.278191
Percent of sequences in Uniprot 99.1100 99.110000 0.917975
DOGMA 94.1800 94.180000 0.842039
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DOGMA is a contribution to PQI from the Bornberglab. Please cite: Elias Dohmen, Lukas P.M. Kremer, Erich Bornberg-Bauer, and Carsten Kemena (2016) DOGMA: domain-based transcriptome and proteome quality assessment. Bioinformatics doi:10.1093/bioinformatics/btw231.

PQI is a project of the Computational Genomics Group at the University of Bristol. Please cite: Zaucha, J., Stahlhacke, J., Oates, M.E., Thurlby, N., Rackham, O.J.L., Fang, H., Smithers, B. and Gough, J. (2014) A Proteome Quality Index. Env. Microbiology doi:10.1111/1462-2920.12622. (PDF)