PQI

Haemophilus ducreyi 35000HP

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus ducreyi

Source: NCBI

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Proteome Quality Index Information

Scoring Method Raw Score Metric Rating
X content 0.0000 0.000000 1.000000
PubMed Publication Count 0.0000 0.000000 0.000000
Percent of Sequences covered 63.0000 1.516377 0.373269
Number of Superfamilies 561.0000 2.820931 0.269658
Average Sequence Length 280.0000 1.837941 0.261254
Average hit length 281.0000 1.199131 0.494407
Number of Families 504.0000 3.291054 0.217781
Number of Unique Architectures 668.0000 2.790714 0.230796
Percent with Assignment 62.0000 2.445734 0.192366
Percent of sequences in Uniprot 99.0200 99.020000 0.916124
DOGMA 94.3500 94.350000 0.844074
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DOGMA is a contribution to PQI from the Bornberglab. Please cite: Elias Dohmen, Lukas P.M. Kremer, Erich Bornberg-Bauer, and Carsten Kemena (2016) DOGMA: domain-based transcriptome and proteome quality assessment. Bioinformatics doi:10.1093/bioinformatics/btw231.

PQI is a project of the Computational Genomics Group at the University of Bristol. Please cite: Zaucha, J., Stahlhacke, J., Oates, M.E., Thurlby, N., Rackham, O.J.L., Fang, H., Smithers, B. and Gough, J. (2014) A Proteome Quality Index. Env. Microbiology doi:10.1111/1462-2920.12622. (PDF)