PQI

Pasteurella multocida subsp. multocida str. HN06

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella; Pasteurella multocida; Pasteurella multocida subsp. multocida

Source: NCBI

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Proteome Quality Index Information

Scoring Method Raw Score Metric Rating
X content 0.0000 0.000000 1.000000
PubMed Publication Count 2.0000 2.000000 0.456269
Percent of Sequences covered 65.0000 0.496520 0.803144
Number of Superfamilies 659.0000 0.965678 0.647941
Average Sequence Length 308.0000 0.225939 0.911848
Average hit length 292.0000 0.591253 0.747035
Number of Families 635.0000 0.621738 0.771042
Number of Unique Architectures 857.0000 0.661144 0.750393
Percent with Assignment 69.0000 0.223040 0.914521
Percent of sequences in Uniprot 100.0000 100.000000 1.000000
DOGMA 96.2300 96.230000 0.879789
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DOGMA is a contribution to PQI from the Bornberglab. Please cite: Elias Dohmen, Lukas P.M. Kremer, Erich Bornberg-Bauer, and Carsten Kemena (2016) DOGMA: domain-based transcriptome and proteome quality assessment. Bioinformatics doi:10.1093/bioinformatics/btw231.

PQI is a project of the Computational Genomics Group at the University of Bristol. Please cite: Zaucha, J., Stahlhacke, J., Oates, M.E., Thurlby, N., Rackham, O.J.L., Fang, H., Smithers, B. and Gough, J. (2014) A Proteome Quality Index. Env. Microbiology doi:10.1111/1462-2920.12622. (PDF)