PQI

Haemophilus influenzae R2846

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus; Haemophilus influenzae

Source: NCBI

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Proteome Quality Index Information

Scoring Method Raw Score Metric Rating
X content 0.0000 0.000000 1.000000
PubMed Publication Count 2.0000 2.000000 0.456269
Percent of Sequences covered 70.0000 1.407735 0.407864
Number of Superfamilies 596.0000 0.890876 0.674624
Average Sequence Length 319.0000 0.941718 0.569904
Average hit length 289.0000 0.118475 0.952382
Number of Families 583.0000 0.419578 0.857980
Number of Unique Architectures 750.0000 0.786401 0.698764
Percent with Assignment 78.0000 1.744789 0.292988
Percent of sequences in Uniprot 100.0000 100.000000 1.000000
DOGMA 94.5200 94.520000 0.846823
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DOGMA is a contribution to PQI from the Bornberglab. Please cite: Elias Dohmen, Lukas P.M. Kremer, Erich Bornberg-Bauer, and Carsten Kemena (2016) DOGMA: domain-based transcriptome and proteome quality assessment. Bioinformatics doi:10.1093/bioinformatics/btw231.

PQI is a project of the Computational Genomics Group at the University of Bristol. Please cite: Zaucha, J., Stahlhacke, J., Oates, M.E., Thurlby, N., Rackham, O.J.L., Fang, H., Smithers, B. and Gough, J. (2014) A Proteome Quality Index. Env. Microbiology doi:10.1111/1462-2920.12622. (PDF)