PQI

Mannheimia haemolytica D153

Taxonomy: Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia; Mannheimia haemolytica

Source: http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=1261126

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Proteome Quality Index Information

Scoring Method Raw Score Metric Rating
X content 0.0000 0.000000 1.000000
PubMed Publication Count 2.0000 2.000000 0.456269
Percent of Sequences covered 63.0000 1.281398 0.452581
Number of Superfamilies 666.0000 1.179503 0.576430
Average Sequence Length 290.0000 0.879131 0.599979
Average hit length 284.0000 0.629853 0.729722
Number of Families 631.0000 0.537490 0.806495
Number of Unique Architectures 883.0000 1.027977 0.603138
Percent with Assignment 64.0000 1.357810 0.403994
Percent of sequences in Uniprot 100.0000 100.000000 1.000000
DOGMA 96.2300 96.230000 0.879789
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DOGMA is a contribution to PQI from the Bornberglab. Please cite: Elias Dohmen, Lukas P.M. Kremer, Erich Bornberg-Bauer, and Carsten Kemena (2016) DOGMA: domain-based transcriptome and proteome quality assessment. Bioinformatics doi:10.1093/bioinformatics/btw231.

PQI is a project of the Computational Genomics Group at the University of Bristol. Please cite: Zaucha, J., Stahlhacke, J., Oates, M.E., Thurlby, N., Rackham, O.J.L., Fang, H., Smithers, B. and Gough, J. (2014) A Proteome Quality Index. Env. Microbiology doi:10.1111/1462-2920.12622. (PDF)